RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 OR56B2PQ8NGI1 322 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CPPED1Q9BRF8 314 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 NICN1Q9BSH3 213 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 PRRT4C9JH25 899 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TSFMP43897 325 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CYCSP99999 105 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 FAM83FQ8NEG4 500 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 OR5T1Q8NG75 326 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 OLAHQ9NV23 265 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CBY1Q9Y3M2 126 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 IGHV3-20A0A0C4DH32 117 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TRBV4-1A0A0J9YWV2 114 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TMEM202A6NGA9 273 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 PYCR3Q53H96 274 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 KCTD20Q7Z5Y7 419 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 OR5B12Q96R08 314 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 BABAM2Q9NXR7 383 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 C7orf72A4D263 438 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 ARGFXA6NJG6 315 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF814B7Z6K7 855 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 WNT11O96014 354 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 UBBP0CG47 229 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 UBCP0CG48 685 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TNFSF8P32971 234 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 RPS27AP62979 156 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 UBA52P62987 128 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 KCNAB1Q14722 419 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TPRA1Q86W33 373 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TSPAN10Q9H1Z9 355 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 GLIPR2Q9H4G4 154 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 SLAMF8Q9P0V8 285 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 TBC1D29Q9UFV1 150 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 RGPD1P0DJD0 1748 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 ALS2Q96Q42 1657 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 OR6C65A6NJZ3 312 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 EDIL3O43854 480 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CDK1P06493 297 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 ACP2P11117 423 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 JUNBP17275 347 aaPredicted RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 DLSTP36957 453 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 MPEG1Q2M385 716 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 FAM69AQ5T7M9 428 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 RPS19BP1Q86WX3 136 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 OR4F15Q8NGB8 312 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 SLC19A3Q9BZV2 496 aa12.17□□□□□ -0.46
PTPRF-215ENST00000496447 CNOT2Q9NZN8 540 aaKnown RBP12.17□□□□□ -0.46
PTPRF-215ENST00000496447 GPR171O14626 319 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 ABHD16AO95870 558 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 PTPN6P29350 595 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 LIM2P55344 173 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 TBCEQ15813 527 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-215ENST00000496447 AVPI1Q5T686 147 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF813Q6ZN06 617 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 LYSMD2Q8IV50 215 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 CXorf36Q9H7Y0 433 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 DUSP13Q9UII6 198 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 MYH9P35579 1960 aaKnown RBP12.16□□□□□ -0.46
PTPRF-215ENST00000496447 FAM166BA8MTA8 275 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SEC14L2O76054 403 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 NPPBP16860 134 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 MSR1P21757 451 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 GPR176Q14439 515 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 BCL2A1Q16548 175 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 LTC4SQ16873 150 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF691Q5VV52 312 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SLX4IPQ5VYV7 408 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 OR2T11Q8NH01 316 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 RNF128Q8TEB7 428 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 RPS10P5Q9NQ39 176 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 ATG4BQ9Y4P1 393 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 CCR5P51681 352 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SLC35D2Q76EJ3 337 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 COX15Q7KZN9 410 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 TNFRSF13CQ96RJ3 184 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 OR51E2Q9H255 320 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 IFT22Q9H7X7 185 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 MOKQ9UQ07 419 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 E9PI62 339 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 LINC01565O15544 149 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 B4GAT1O43505 415 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SLC22A5O76082 557 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 EDN3P14138 238 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 TAS2R20P59543 309 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 PFN3P60673 137 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 MRPS10P82664 201 aaKnown RBP12.16□□□□□ -0.46
PTPRF-215ENST00000496447 MEF2DQ14814 521 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF750Q32MQ0 723 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 YOD1Q5VVQ6 348 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SIGIRRQ6IA17 410 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 RLIMQ9NVW2 624 aa12.16□□□□□ -0.46
PTPRF-215ENST00000496447 SDHAF2Q9NX18 166 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms