RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 OR5J2Q8NH18 312 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 EXOSC8Q96B26 276 aaKnown RBP13.76□□□□□ -0.21
MACF1-223ENST00000496360 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 PELI2Q9HAT8 420 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 COMMD9Q9P000 198 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 RNF222A6NCQ9 220 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 SIGLEC5O15389 551 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 TSPAN6O43657 245 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 VNN2O95498 520 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 OR2T7P0C7T2 308 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 AKAIN1P0CW23 69 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 ADCYAP1P18509 176 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 COL9A1P20849 921 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 SDHBP21912 280 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 RGS8P57771 180 aaPredicted RBP13.76□□□□□ -0.21
MACF1-223ENST00000496360 RPS11P62280 158 aaKnown RBP eCLIP13.76□□□□□ -0.21
MACF1-223ENST00000496360 SIGLEC14Q08ET2 396 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 ENPP7Q6UWV6 458 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 NDUFAF7Q7L592 441 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 GRASPQ7Z6J2 395 aaPredicted RBP13.76□□□□□ -0.21
MACF1-223ENST00000496360 POMGNT2Q8NAT1 580 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 OR2T27Q8NH04 317 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 STOML3Q8TAV4 291 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 AMDHD1Q96NU7 426 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 MCHR1Q99705 422 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 ZNF471Q9BX82 626 aaPredicted RBP13.76□□□□□ -0.21
MACF1-223ENST00000496360 MS4A8Q9BY19 250 aa13.76□□□□□ -0.21
MACF1-223ENST00000496360 PMELP40967 661 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 NAAAQ02083 359 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 UAP1L1Q3KQV9 507 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 RAB12Q6IQ22 244 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 C11orf87Q6NUJ2 197 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 RFLNAQ6ZTI6 216 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 FAM129CQ86XR2 697 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 ZNF561Q8N587 486 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 DERL3Q96Q80 235 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 MYADMQ96S97 322 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 ZDHHC5Q9C0B5 715 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 SLITRK2Q9H156 845 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 CCDC86Q9H6F5 360 aaKnown RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 MMP26Q9NRE1 261 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 TMEM100Q9NV29 134 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 MIOXQ9UGB7 285 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 SH2B3Q9UQQ2 575 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 DOCK8Q8NF50 2099 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 A0A1B0GTI1 187 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 TMEM272A0A1B0GTI8 110 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 ZNF729A6NN14 1252 aaPredicted RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 M0R296 226 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 TO15178 435 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 CD79AP11912 226 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 ZNF3P17036 446 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 CDK2P24941 298 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 TAS2R38P59533 333 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 TCEAL8Q8IYN2 117 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 OR4C16Q8NGL9 310 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 OR13C5Q8NGS8 318 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 VRK1Q99986 396 aaPredicted RBP13.75□□□□□ -0.21
MACF1-223ENST00000496360 GLIPR2Q9H4G4 154 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 B4GALT6Q9UBX8 382 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 MAFFQ9ULX9 164 aa13.75□□□□□ -0.21
MACF1-223ENST00000496360 TMEM202A6NGA9 273 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 TMEM200CA6NKL6 621 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 OR2AG2A6NM03 316 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 ST8SIA5O15466 376 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 SLC25A12O75746 678 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 LRG1P02750 347 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 IRF1P10914 325 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 TRHRP34981 398 aaPredicted RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 STARD6P59095 220 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 NTHL1P78549 312 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 OC90Q02509 493 aaPredicted RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 TGM3Q08188 693 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 EIF2S3LQ2VIR3 472 aaKnown RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 PCGF3Q3KNV8 242 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 PRAMEF14Q5SWL7 426 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 RPTNQ6XPR3 784 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 SZRD1Q7Z422 152 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 PARGQ86W56 976 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 KDF1Q8NAX2 398 aaPredicted RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 OR5M8Q8NGP6 311 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 C2CD4CQ8TF44 421 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 PELI1Q96FA3 418 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 MED20Q9H944 212 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 ASF1BQ9NVP2 202 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 SIDT1Q9NXL6 827 aaKnown RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 OR5V1Q9UGF6 321 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 DMRT1Q9Y5R6 373 aa13.74□□□□□ -0.21
MACF1-223ENST00000496360 NUP210Q8TEM1 1887 aaPredicted RBP13.74□□□□□ -0.21
MACF1-223ENST00000496360 TRBV2A0A0J9YWF9 115 aa13.73□□□□□ -0.21
MACF1-223ENST00000496360 OR5H14A6NHG9 310 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms