RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OR2T4Q8NH00 348 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 NEIL3Q8TAT5 605 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 STK35Q8TDR2 534 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 CHPT1Q8WUD6 406 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SNX33Q8WV41 574 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 LIPHQ8WWY8 451 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 ACOT12Q8WYK0 555 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 ST8SIA1Q92185 356 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 TTC9Q92623 222 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 DDIT4LQ96D03 193 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 TBX5Q99593 518 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 TEAD3Q99594 435 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SLC30A2Q9BRI3 323 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 KATNB1Q9BVA0 655 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 GSX2Q9BZM3 304 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SEMA4CQ9C0C4 833 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 STRADBQ9C0K7 418 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SLC26A1Q9H2B4 701 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 MCCC2Q9HCC0 563 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SERINC1Q9NRX5 453 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 SNTG1Q9NSN8 517 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 FAIMQ9NVQ4 179 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 BABAM2Q9NXR7 383 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 KLRF1Q9NZS2 232 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 CHRNA9Q9UGM1 479 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 PCDHGB2Q9Y5G2 931 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 TMEM14AQ9Y6G1 99 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 FREM3P0C091 2139 aa6.31□□□□□ -1.4
USP39-219ENST00000496047 TECTAO75443 2155 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 hCG_2014768A0A024R1R8 64 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 A0A1W2PRG6 482 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CCDC182A6NF36 153 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 OR2W5A6NFC9 320 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 TMEM221A6NGB7 291 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 VSTM2BA6NLU5 285 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 MCIDASD6RGH6 385 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 M0R296 226 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 GABRPO00591 440 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 EIF1AYO14602 144 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 RNF13O43567 381 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 SLC19A2O60779 497 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SERPINI2O75830 405 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 UPK1BO75841 260 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ARL6IP5O75915 188 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 GLCEO94923 617 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SLC2A10O95528 541 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 MRPL3P09001 348 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 MYF5P13349 255 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 FKBP2P26885 142 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 MAPK3P27361 379 aaPredicted RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 IDUAP35475 653 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 TALDO1P37837 337 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ETV6P41212 452 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 FOLR3P41439 243 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CRYBB2P43320 205 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 INPP1P49441 399 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SLC25A1P53007 311 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 GAS1P54826 345 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 FXYD6P3P58550 94 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 RPS4XP62701 263 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 RPS25P62851 125 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 PLAURQ03405 335 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 HNRNPA0Q13151 305 aaKnown RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 QPRTQ15274 297 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PRAMEF17Q5VTA0 474 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 FAM205BPQ63HN1 556 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SLC6A19Q695T7 634 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PWWP2BQ6NUJ5 590 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 LEG1Q6P5S2 330 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PAQR6Q6TCH4 344 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PLEKHG7Q6ZR37 379 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 PRR23CQ6ZRP0 262 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SHISA6Q6ZSJ9 500 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 KCTD20Q7Z5Y7 419 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 MARCH3Q86UD3 253 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CACTIN-AS1Q8N1I8 211 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CENPSQ8N2Z9 138 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ZNF321PQ8N8H1 164 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ZNF441Q8N8Z8 693 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 OR5M3Q8NGP4 307 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 OR6K6Q8NGW6 343 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 OR6S1Q8NH40 331 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 OR4K13Q8NH42 304 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 THAP4Q8WY91 577 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ATOH1Q92858 354 aaPredicted RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 MR1Q95460 341 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SLC25A46Q96AG3 418 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 KIAA1143Q96AT1 154 aaPredicted RBP6.3□□□□□ -1.4
USP39-219ENST00000496047 ARSGQ96EG1 525 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 LOXL4Q96JB6 756 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 C4orf36Q96KX1 117 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 WDFY2Q96P53 400 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 SNX18Q96RF0 628 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 CMKLR1Q99788 373 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 KCNS3Q9BQ31 491 aa6.3□□□□□ -1.4
USP39-219ENST00000496047 ZPBPQ9BS86 351 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms