RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 RNF185Q96GF1 192 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 ITCHQ96J02 903 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 SECISBP2Q96T21 854 aaKnown RBP2.14□□□□□ -2.07
VPS50-219ENST00000495039 ZSCAN5AQ9BUG6 496 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 RNF167Q9H6Y7 350 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 SIAEQ9HAT2 523 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 NTN4Q9HB63 628 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 IL26Q9NPH9 171 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 SMOXQ9NWM0 555 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 BFARQ9NZS9 450 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 PTBP2Q9UKA9 531 aaKnown RBP2.14□□□□□ -2.07
VPS50-219ENST00000495039 SLC25A15Q9Y619 301 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 ARHGAP21Q5T5U3 1957 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 FANCIQ9NVI1 1328 aa2.14□□□□□ -2.07
VPS50-219ENST00000495039 C15orf38-AP3S2A0A0A6YYH1 394 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 A0A0G2JLM5 398 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 TMX2-CTNND1H3BSU7 103 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 NBR2O15453 112 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 PRKAB2O43741 272 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 ADRB3P13945 408 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 TBPP20226 339 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 CCR1P32246 355 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 SLC26A3P40879 764 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 QARSP47897 775 aaKnown RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 CASP4P49662 377 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 CCR6P51684 374 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 SPIBQ01892 262 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 FGL1Q08830 312 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 NCBP1Q09161 790 aaKnown RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 TAF7Q15545 349 aaPredicted RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 EXOC3L2Q2M3D2 409 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 CTRB2Q6GPI1 263 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 FRMPD2BQ6IN97 320 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 C6orf120Q7Z4R8 191 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 LINC01551Q86U37 167 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 LYPD1Q8N2G4 141 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 TPRX1Q8N7U7 411 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 FNDC5Q8NAU1 212 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 MFSD9Q8NBP5 474 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 CCDC54Q8NEL0 328 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 ACER1Q8TDN7 264 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 TIMD4Q96H15 378 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 RPRD1AQ96P16 312 aaPredicted RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 OXGR1Q96P68 337 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 SLC38A2Q96QD8 506 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 TMEM246Q9BRR3 403 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 PELOQ9BRX2 385 aaKnown RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 HDHD3Q9BSH5 251 aaPredicted RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 CLMPQ9H6B4 373 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 POLE4Q9NR33 117 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 GLRX2Q9NS18 164 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 QPCTLQ9NXS2 382 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 SLC25A37Q9NYZ2 338 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 STOX2Q9P2F5 926 aaPredicted RBP2.13□□□□□ -2.07
VPS50-219ENST00000495039 PTCH1Q13635 1447 aa2.13□□□□□ -2.07
VPS50-219ENST00000495039 IGKV2-28A0A075B6P5 120 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 TRAV26-1A0A087WT03 109 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 IGHV3-64DA0A0J9YX35 117 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 RBMY1BA6NDE4 496 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 RBMY1EA6NEQ0 496 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 CCDC182A6NF36 153 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 C12orf71A8MTZ7 269 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 SNAI2O43623 268 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 SNNO75324 88 aaPredicted RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 IGKV2D-28P01615 120 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 RBMY1DP0C7P1 496 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 RBMY1A1P0DJD3 496 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 DBTP11182 482 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 TDGF1P13385 188 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 BTCP35070 178 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 NMUP48645 174 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 TDGF1P3P51864 188 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 CRYBB1P53674 252 aaPredicted RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 PLD1Q13393 1074 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 OR5I1Q13606 314 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 GGTLC2Q14390 218 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 GPNMBQ14956 572 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 KLHL38Q2WGJ6 581 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 LRRC10Q5BKY1 277 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 TSPO2Q5TGU0 170 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 ZSCAN25Q6NSZ9 544 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 Q6ZPB1 254 aaPredicted RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 ZNF621Q6ZSS3 439 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 UTS2BQ765I0 119 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 PLA2G4DQ86XP0 818 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 ECHDC2Q86YB7 292 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 FAM133AQ8N9E0 248 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 ACOT4Q8N9L9 421 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 DUSP18Q8NEJ0 188 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 STEAP2Q8NFT2 490 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 IPMKQ8NFU5 416 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 NPBQ8NG41 125 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 OR10G9Q8NGN4 311 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 ACOT11Q8WXI4 607 aaPredicted RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 RSPH1Q8WYR4 309 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 TMEM158Q8WZ71 300 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 RIOK2Q9BVS4 552 aaKnown RBP2.12□□□□□ -2.07
VPS50-219ENST00000495039 GBA3Q9H227 469 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 YY1AP1Q9H869 796 aa2.12□□□□□ -2.07
VPS50-219ENST00000495039 CCL28Q9NRJ3 127 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms