RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RPS5P46782 204 aaKnown RBP10.97□□□□□ -0.65
SKA1-205ENST00000494518 IDH3GP51553 393 aaPredicted RBP10.97□□□□□ -0.65
SKA1-205ENST00000494518 MAP2K6P52564 334 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 MVDP53602 400 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 ARF1P84077 181 aaKnown RBP10.97□□□□□ -0.65
SKA1-205ENST00000494518 IL1RL1Q01638 556 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 NPRL3Q12980 569 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 CR1LQ2VPA4 569 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 SVOPLQ8N434 492 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 MGARPQ8TDB4 240 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 SLC38A5Q8WUX1 472 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 VPS33AQ96AX1 596 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 OBP2BQ9NPH6 170 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 DSPPQ9NZW4 1301 aa10.97□□□□□ -0.65
SKA1-205ENST00000494518 WNK2Q9Y3S1 2297 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 ARPC4-TTLL3A0A0A6YYG9 625 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 LYNX1G3V0Z9 82 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 NPIPB7O75200 414 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 LYNX1P0DP58 116 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 ZNF23P17027 643 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 HNF1AP20823 631 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 GTF2E2P29084 291 aaKnown RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 CAPZA2P47755 286 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 CRISP3P54108 245 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 HGFACQ04756 655 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 LARS2Q15031 903 aaKnown RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 CEP85LQ5SZL2 805 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 RNF220Q5VTB9 566 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 HHATQ5VTY9 493 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 SPATA21Q7Z572 469 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 OR9I1Q8NGQ6 314 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 MAL2Q969L2 176 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 ZNF837Q96EG3 531 aaPredicted RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 KTI12Q96EK9 354 aaPredicted RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 C1orf159Q96HA4 380 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 PTDSS2Q9BVG9 487 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 PLK3Q9H4B4 646 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 TPT1P8Q9HAU6 139 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 SSU72Q9NP77 194 aaKnown RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 CALML5Q9NZT1 146 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 CRNNQ9UBG3 495 aaPredicted RBP10.96□□□□□ -0.65
SKA1-205ENST00000494518 RASD1Q9Y272 281 aa10.96□□□□□ -0.65
SKA1-205ENST00000494518 TENM1Q9UKZ4 2725 aa10.96□□□□□ -0.66
SKA1-205ENST00000494518 FTCDNL1E5RQL4 147 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 HDAC3O15379 428 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 SNUPNO95149 360 aaKnown RBP10.95□□□□□ -0.66
SKA1-205ENST00000494518 VAMP5O95183 116 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 STAMBPO95630 424 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 IGLV1-44P01699 117 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 C8BP07358 591 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 DAOP14920 347 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 ZNF43P17038 809 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 PPOXP50336 477 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 EGR4Q05215 589 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 CCNIQ14094 377 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 TRIP10Q15642 601 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 EFNB3Q15768 340 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 CEACAM16Q2WEN9 425 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 SLC9B1Q4ZJI4 515 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 ZNF311Q5JNZ3 666 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 C6orf10Q5SRN2 563 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 CARD17Q5XLA6 110 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 KRT80Q6KB66 452 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 MDP1Q86V88 176 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 CDK20Q8IZL9 346 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 KIRREL3Q8IZU9 778 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 MREGQ8N565 214 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 OR4F15Q8NGB8 312 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 SNX18Q96RF0 628 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 SPATA9Q9BWV2 254 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 RAB1BQ9H0U4 201 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 TPK1Q9H3S4 243 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 PIF1Q9H611 641 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 CACYBPQ9HB71 228 aaKnown RBP10.95□□□□□ -0.66
SKA1-205ENST00000494518 GPR35Q9HC97 309 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 DYNLRB1Q9NP97 96 aa10.95□□□□□ -0.66
SKA1-205ENST00000494518 DYSFO75923 2080 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 IGHV2OR16-5A0A0B4J2B6 119 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 OR6C65A6NJZ3 312 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 M0R082 166 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 SLC43A1O75387 559 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 SLC22A3O75751 556 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 PDE5AO76074 875 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 IGKV3-15P01624 115 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 NPR2P20594 1047 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 APEX1P27695 318 aaKnown RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 LRRC74AQ0VAA2 488 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 SNTB2Q13425 540 aaKnown RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 C1DQ13901 141 aaKnown RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 ADRM1Q16186 407 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 PDCD4Q53EL6 469 aaKnown RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 PHYHD1Q5SRE7 291 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 WDR93Q6P2C0 686 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 GPR137CQ8N3F9 429 aa10.94□□□□□ -0.66
SKA1-205ENST00000494518 GLB1L3Q8NCI6 653 aaPredicted RBP10.94□□□□□ -0.66
SKA1-205ENST00000494518 MFSD8Q8NHS3 518 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms