RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ANKRD27Q96NW4 1050 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 ROPN1BQ9BZX4 212 aaPredicted RBP8.36□□□□□ -1.07
UBR4-216ENST00000494503 ROPN1Q9HAT0 212 aaPredicted RBP8.36□□□□□ -1.07
UBR4-216ENST00000494503 PNPOQ9NVS9 261 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 CALML5Q9NZT1 146 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 RASD1Q9Y272 281 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 NOX1Q9Y5S8 564 aa8.36□□□□□ -1.07
UBR4-216ENST00000494503 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 M0R3G1 203 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 FAAHO00519 579 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 TYROBPO43914 113 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 SERPINI2O75830 405 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 ALDOCP09972 364 aaKnown RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 TFPTP0C1Z6 253 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 PNMTP11086 282 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 PRG2P13727 222 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 NQO1P15559 274 aaKnown RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 TCN1P20061 433 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 ETV4P43268 484 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 SH3BGRP55822 239 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 DSTNP60981 165 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 VSNL1P62760 191 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 ACTG1P63261 375 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 TXNL4AP83876 142 aaKnown RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 HOXC5Q00444 222 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 STX3Q13277 289 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 DAG1Q14118 895 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 TRIP10Q15642 601 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 EFNB3Q15768 340 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 CEACAM16Q2WEN9 425 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 C1QTNF12Q5T7M4 302 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 GKAP1Q5VSY0 366 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 LINGO2Q7L985 606 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 SERPINA11Q86U17 422 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 MDP1Q86V88 176 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 MYPOPQ86VE0 399 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 EPHX4Q8IUS5 362 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 CDK20Q8IZL9 346 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 CLIP4Q8N3C7 705 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 RFLNBQ8N5W9 214 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 ANKRD42Q8N9B4 389 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 MGARPQ8TDB4 240 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 UBASH3BQ8TF42 649 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 NEU4Q8WWR8 484 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 BCL2L2Q92843 193 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 METTL17Q9H7H0 456 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 MOV10Q9HCE1 1003 aaKnown RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 SEC14L4Q9UDX3 406 aa8.35□□□□□ -1.07
UBR4-216ENST00000494503 FBXO9Q9UK97 447 aaPredicted RBP8.35□□□□□ -1.07
UBR4-216ENST00000494503 A0A096LPI6 279 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 ARPC4-TTLL3A0A0A6YYG9 625 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 IGHV2OR16-5A0A0B4J2B6 119 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 C5orf58C9J3I9 102 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 BIRC5O15392 142 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 AKAP8O43823 692 aaKnown RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 PCMT1P22061 227 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 RPS4Y1P22090 263 aaKnown RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 PAX7P23759 505 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 EPHA3P29320 983 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 ARR3P36575 388 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 ACAA2P42765 397 aaKnown RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 NCALDP61601 193 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 GALK2Q01415 458 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 HGFACQ04756 655 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 RUNX1T1Q06455 604 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 PIGFQ07326 219 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 LRRC74AQ0VAA2 488 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 ZNF311Q5JNZ3 666 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 HHATQ5VTY9 493 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 THSD4Q6ZMP0 1018 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 GLCCI1Q86VQ1 547 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 KIRREL3Q8IZU9 778 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 C10orf53Q8N6V4 93 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 NUP37Q8NFH4 326 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 TMEM19Q96HH6 336 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 ZNF317Q96PQ6 595 aaPredicted RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 SORT1Q99523 831 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 PIF1Q9H611 641 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 WDR55Q9H6Y2 383 aaPredicted RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 MEAF6Q9HAF1 191 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 NOX3Q9HBY0 568 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 GPR35Q9HC97 309 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 AIG1Q9NVV5 245 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 SELENONQ9NZV5 590 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 FZR1Q9UM11 496 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 USP22Q9UPT9 525 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
UBR4-216ENST00000494503 CMAHPQ9Y471 501 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 DYSFO75923 2080 aa8.34□□□□□ -1.07
UBR4-216ENST00000494503 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 A0A1W2PPW3 197 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 M0R082 166 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 M0R233 179 aa8.33□□□□□ -1.08
UBR4-216ENST00000494503 AIM2O14862 343 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms