RNA–Protein interactions for RNA: ENST00000494080.5

CCDC88B-209, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 4,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-209ENST00000494080 OR1J4Q8NGS1 313 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 OR1F2PQ96R84 312 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CRB3Q9BUF7 120 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ICKQ9UPZ9 632 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TEX13DA0A0J9YY54 714 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 RAB19A4D1S5 217 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 LEUTXA8MZ59 168 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TP53I11O14683 189 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TDGQ13569 410 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 RAB11FIP2Q7L804 512 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 DCUN1D4Q92564 292 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 C19orf43Q9BQ61 176 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 A4GALTQ9NPC4 353 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ZMAT5Q9UDW3 170 aaKnown RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 CBLCQ9ULV8 474 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CAMK2AQ9UQM7 478 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TMEM14AQ9Y6G1 99 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ZNF878C9JN71 531 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 SRPX2O60687 465 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 CRYBB2P43320 205 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CBX5P45973 191 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TPBGQ13641 420 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 IGSF11Q5DX21 431 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CLLU1Q5K131 121 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 OR2A1Q8NGT9 310 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 OR5AK2Q8NH90 309 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 UPRTQ96BW1 309 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 DKKL1Q9UK85 242 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 TET1Q8NFU7 2136 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ASXL3Q9C0F0 2248 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CEACAM5P06731 702 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 RFX2P48378 723 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 RGS19P49795 217 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 CCR9P51686 369 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 AKR1C2P52895 323 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 RPS27AP62979 156 aaKnown RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 UBA52P62987 128 aaKnown RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 AKR1C1Q04828 323 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ZNF322Q6U7Q0 402 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 MAMDC2Q7Z304 686 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 OR52N1Q8NH53 320 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 OR51Q1Q8NH59 317 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ZNF707Q96C28 371 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 SEC22AQ96IW7 307 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 FLVCR2Q9UPI3 526 aa15.07■□□□□ 0
CCDC88B-209ENST00000494080 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.07■□□□□ 0
CCDC88B-209ENST00000494080 TVP23AA6NH52 213 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 OPN1LWP04000 364 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 CSF1P09603 554 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 AKAIN1P0CW23 69 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ANXA7P20073 488 aaKnown RBP15.06■□□□□ 0
CCDC88B-209ENST00000494080 SGCAQ16586 387 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 TCTN3Q6NUS6 607 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 MFSD12Q6NUT3 480 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 SLC35F2Q8IXU6 374 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 IL17RCQ8NAC3 791 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 SMAP2Q8WU79 429 aaPredicted RBP15.06■□□□□ 0
CCDC88B-209ENST00000494080 SCGB3A2Q96PL1 93 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 HRH4Q9H3N8 390 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 C1GALT1Q9NS00 363 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 SLC6A5Q9Y345 797 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 PPIL1Q9Y3C6 166 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 VSTM2BA6NLU5 285 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ERVH48-1M5A8F1 160 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 HCKP08631 526 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 HBQ1P09105 142 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ACSM4P0C7M7 580 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 SDHBP21912 280 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 FLI1Q01543 452 aaPredicted RBP15.06■□□□□ 0
CCDC88B-209ENST00000494080 KIAA0040Q15053 153 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 RHEBQ15382 184 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 NKAIN2Q5VXU1 208 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 DGLUCYQ7Z3D6 616 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ZER1Q7Z7L7 766 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 NECAB3Q96P71 396 aaPredicted RBP15.06■□□□□ 0
CCDC88B-209ENST00000494080 HMGN4O00479 90 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 GPR171O14626 319 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 RGS11O94810 467 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 H2BFMP0C1H6 154 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 MRPL19P49406 292 aaKnown RBP15.06■□□□□ 0
CCDC88B-209ENST00000494080 CLRN1P58418 232 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 TMUB2Q71RG4 321 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ANKRD53Q8N9V6 530 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 OR5L2Q8NGL0 311 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 DNTTIP1Q9H147 329 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 CHST2Q9Y4C5 530 aa15.06■□□□□ 0
CCDC88B-209ENST00000494080 ITGA5P08648 1049 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 PLGLB1Q02325 96 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 SMAD2Q15796 467 aaKnown RBP15.05■□□□□ 0
CCDC88B-209ENST00000494080 RAB11BQ15907 218 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 TMEM255BQ8WV15 326 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 ZNF768Q9H5H4 540 aaKnown RBP15.05■□□□□ 0
CCDC88B-209ENST00000494080 CUTCQ9NTM9 273 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 ATP1B1P05026 303 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 CISD3P0C7P0 127 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 CCNOP22674 350 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 ADH6P28332 368 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 CASRP41180 1078 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 EMP2P54851 167 aa15.05■□□□□ 0
CCDC88B-209ENST00000494080 RAB38P57729 211 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms