RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 CT62P0C5K7 136 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 NCK1P16333 377 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 IGFBP2P18065 325 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TSPAN8P19075 237 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AGAP20933 346 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 STOMP27105 288 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 MAPK1P28482 360 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SSTR4P31391 388 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 LIPAP38571 399 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ADH7P40394 386 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 GSTM5P46439 218 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 INPP1P49441 399 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 RGS6P49758 472 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 HERVK_113P63132 956 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ERVK-8P63133 956 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TNFRSF17Q02223 184 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PLGLB1Q02325 96 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 DUSP2Q05923 314 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PMPCAQ10713 525 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 DUSP8Q13202 625 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 GTF2H2Q13888 395 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 CAPRIN1Q14444 709 aaKnown RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PCBP2Q15366 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 CPSF6Q16630 551 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 GXYLT1Q4G148 440 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TMEM35AQ53FP2 167 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 DDI2Q5TDH0 399 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PRAMEF20Q5VT98 475 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 CD276Q5ZPR3 534 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 HIST2H2AA3Q6FI13 130 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 GTF2H2CQ6P1K8 395 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 MTFR2Q6P444 385 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 FAM131AQ6UXB0 335 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 MEX3BQ6ZN04 569 aaKnown RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AHSA2Q719I0 299 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TRILQ7L0X0 811 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 GDF7Q7Z4P5 450 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 HSD17B13Q7Z5P4 300 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ZZZ3Q8IYH5 903 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 CLDN22Q8N7P3 220 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PTGR2Q8N8N7 351 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 L3MBTL4Q8NA19 623 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SLC37A3Q8NCC5 494 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 OR10G3Q8NGC4 313 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 OR6M1Q8NGM8 313 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 DAZLQ92904 295 aaKnown RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 FAM162AQ96A26 154 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 RGMAQ96B86 450 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 CMTM7Q96FZ5 175 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 KLHL15Q96M94 604 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ERMAPQ96PL5 475 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PDCD10Q9BUL8 212 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ERVK-6Q9BXR3 956 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 BRINP2Q9C0B6 783 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ENKD1Q9H0I2 346 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 C11orf54Q9H0W9 315 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 MED28Q9H204 178 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 MMP28Q9H239 520 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SAV1Q9H4B6 383 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 RIBC2Q9H4K1 309 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 AIG1Q9NVV5 245 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TEX10Q9NXF1 929 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PSORS1C1Q9UIG5 152 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 ERVK-19Q9WJR5 959 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 SNX8Q9Y5X2 465 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 PCNX3Q9H6A9 2034 aa7.43□□□□□ -1.22
HDAC6-234ENST00000493923 TRAV6A0A075B6T7 132 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 A0A0A6YYJ9 748 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 FABP12A6NFH5 140 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 MFSD2BA6NFX1 497 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CLCA1A8K7I4 914 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 A8MT66 165 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 H0YIV9 168 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 M0R082 166 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 MPZL2O60487 215 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 NME6O75414 186 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ATP6AP2O75787 350 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 MLYCDO95822 493 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SERPINA1P01009 418 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 IL1AP01583 271 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 IGHG3P01860 377 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ALDOCP09972 364 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PEPDP12955 493 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ARSBP15848 533 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 EPB42P16452 691 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 FPR1P21462 350 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 ZNF10P21506 573 aaPredicted RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 CNR1P21554 472 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 S100PP25815 95 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 SDC2P34741 201 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 PTGER4P35408 488 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 POLR2JP52435 117 aaKnown RBP7.42□□□□□ -1.22
HDAC6-234ENST00000493923 MAP2K6P52564 334 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 DLX5P56178 289 aa7.42□□□□□ -1.22
HDAC6-234ENST00000493923 WNT3P56703 355 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms