RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CENPNQ96H22 339 aaPredicted RBP10.9□□□□□ -0.66
UPF3A-210ENST00000493727 KLHDC3Q9BQ90 382 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 NMNAT1Q9HAN9 279 aaPredicted RBP10.9□□□□□ -0.66
UPF3A-210ENST00000493727 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 ACER3Q9NUN7 267 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 RPH3AQ9Y2J0 694 aaPredicted RBP10.9□□□□□ -0.66
UPF3A-210ENST00000493727 U3KQV3 271 aa10.9□□□□□ -0.66
UPF3A-210ENST00000493727 DOCK7Q96N67 2140 aa10.9□□□□□ -0.67
UPF3A-210ENST00000493727 JMJD1CQ15652 2540 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 A0A0G2JNJ9 132 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 SAC3D1A6NKF1 404 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 HSPB2A8KAH6 182 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 B4DXG7 233 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 FFAR1O14842 300 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 PNMTP11086 282 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF23P17027 643 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 PRKCAP17252 672 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 CCNA2P20248 432 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 CXCR1P25024 350 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 TACR3P29371 465 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 GCKP35557 465 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 EIF1P41567 113 aaKnown RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 IST1P53990 364 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 PPP1R8Q12972 351 aaKnown RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 RIPK1Q13546 671 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 HSPB2Q16082 182 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 IQCCQ4KMZ1 466 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 DCST1Q5T197 706 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 RTL6Q6ICC9 239 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF730Q6ZMV8 503 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 RRM2BQ7LG56 351 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 YRDCQ86U90 279 aaKnown RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 TSPYL5Q86VY4 417 aaPredicted RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 TGIF2LYQ8IUE0 185 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 NEIL3Q8TAT5 605 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 C3orf49Q96BT1 292 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 NTNG2Q96CW9 530 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 MISP3Q96FF7 219 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 COX4I2Q96KJ9 171 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 MRGPRX4Q96LA9 322 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 EPYCQ99645 322 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 FOXC2Q99958 501 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 ANKRD19PQ9H560 264 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 SERINC1Q9NRX5 453 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 ALKBH4Q9NXW9 302 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 STX18Q9P2W9 335 aaKnown RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 Q9UFV3 132 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 LYVE1Q9Y5Y7 322 aa10.89□□□□□ -0.67
UPF3A-210ENST00000493727 SPIN1Q9Y657 262 aaPredicted RBP10.89□□□□□ -0.67
UPF3A-210ENST00000493727 FN1P02751 2386 aaKnown RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 TRBV4-1A0A0J9YWV2 114 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 A0A1W2PRQ8 180 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 AHRRA9YTQ3 701 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 KPNA4O00629 521 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 RGS13O14921 159 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 CCNB2O95067 398 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 PRSS23O95084 383 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 RFPL3SP0C7P2 107 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 ZNF17P17021 662 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 PTNP21246 168 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 FPR1P21462 350 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 SLC34A1Q06495 639 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 DGCR6Q14129 220 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 GK3PQ14409 553 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 TRIP10Q15642 601 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 EXOC3L2Q2M3D2 409 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 FBXW10Q5XX13 1052 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 HMBOX1Q6NT76 420 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 TTC33Q6PID6 262 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 ATG4DQ86TL0 474 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 PM20D2Q8IYS1 436 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 LILRA2Q8N149 483 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 FAM83FQ8NEG4 500 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 ATP6V1C2Q8NEY4 427 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 OR5M1Q8NGP8 315 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 MPP4Q96JB8 637 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 SFXN2Q96NB2 322 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 ALPK1Q96QP1 1244 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 PIGQQ9BRB3 760 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 OR2B2Q9GZK3 357 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 C12orf10Q9HB07 376 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 KRCC1Q9NPI7 259 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 DLL4Q9NR61 685 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 KIF17Q9P2E2 1029 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 SPRR3Q9UBC9 169 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
UPF3A-210ENST00000493727 EDARQ9UNE0 448 aa10.88□□□□□ -0.67
UPF3A-210ENST00000493727 TMED7-TICAM2A0A0A6YYA0 188 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 DVL2O14641 736 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 OR10H3O60404 316 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 THY1P04216 161 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 IFNGR2P38484 337 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 APOBEC1P41238 236 aaKnown RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 GLYR1Q49A26 553 aaPredicted RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 PODNL1Q6PEZ8 512 aa10.87□□□□□ -0.67
UPF3A-210ENST00000493727 SHQ1Q6PI26 577 aaKnown RBP10.87□□□□□ -0.67
UPF3A-210ENST00000493727 HIPK1Q86Z02 1210 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms