RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FRS3O43559 492 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PLPP2O43688 288 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 NCR1O76036 304 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF432O94892 652 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PRSS23O95084 383 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 OR12D1P0DN82 309 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 CPA3P15088 417 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 ADRA2CP18825 462 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PRTN3P24158 256 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 IL13RA1P78552 427 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 HPCAP84074 193 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 CKAP4Q07065 602 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 EPS8Q12929 822 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 DCAF12L2Q5VW00 463 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PRAMEF8Q5VWM4 474 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PRAMEF7Q5VXH5 474 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 SYT14Q8NB59 555 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 XAGE5Q8WWM1 108 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 DVL3Q92997 716 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 MED29Q9NX70 200 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 GIMAP2Q9UG22 337 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF346Q9UL40 294 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 PPIAL4AQ9Y536 164 aa12.2□□□□□ -0.46
PRPF40A-211ENST00000493468 DSPPQ9NZW4 1301 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CFAP73A6NFT4 308 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 AGAP5A6NIR3 686 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 RNASET2O00584 256 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 PEX11AO75192 247 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CHRM4P08173 479 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF35P13682 527 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CXCR1P25024 350 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CASQ1P31415 396 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 ALDH3B1P43353 468 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 ZP4Q12836 540 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 FXNQ16595 210 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 C6orf136Q5SQH8 315 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CLECL1Q8IZS7 167 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 CLEC4FQ8N1N0 589 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 RNF217Q8TC41 542 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 LRRC58Q96CX6 371 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 C1orf50Q9BV19 199 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 ADPRHL2Q9NX46 363 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 B3GNT2Q9NY97 397 aa12.19□□□□□ -0.46
PRPF40A-211ENST00000493468 A0A096LPI6 279 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 A8MVM7 634 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF99A8MXY4 864 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 TMEM233B4DJY2 109 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 SCN2BO60939 215 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 SLC43A1O75387 559 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF14P17017 642 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 RPS4Y1P22090 263 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 CRHR1P34998 444 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 CCT5P48643 541 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 SEC24CP53992 1094 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 GNA13Q14344 377 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 IL23RQ5VWK5 629 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 SAXO2Q658L1 398 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 TNFAIP8L2Q6P589 184 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 TRMT10CQ7L0Y3 403 aaKnown RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 DOK3Q7L591 496 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 HMGN2P46Q86SG4 172 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 LSRQ86X29 649 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF440Q8IYI8 595 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 FNDC5Q8NAU1 212 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 IFT81Q8WYA0 676 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 RAB8BQ92930 207 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 ZNF75AQ96N20 296 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 SYT3Q9BQG1 590 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 GATA5Q9BWX5 397 aaPredicted RBP12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 MID2Q9UJV3 735 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 NOX1Q9Y5S8 564 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 WNK1Q9H4A3 2382 aa12.18□□□□□ -0.46
PRPF40A-211ENST00000493468 A0A1W2PPM1 405 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 PRAMEF27A3QJZ7 478 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 RIPK2O43353 540 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 FZD7O75084 574 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 NPIPB7O75200 414 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 TFPTP0C1Z6 253 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 UQCRC2P22695 453 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 CLDN8P56748 225 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 CLDN17P56750 224 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 MAD2L1BPQ15013 274 aaPredicted RBP12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 GSG1Q2KHT4 349 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 CEACAM16Q2WEN9 425 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 TRMT5Q32P41 509 aaKnown RBP12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 GPAT3Q53EU6 434 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 C1orf140Q5VVS0 124 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 GPR137CQ8N3F9 429 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 OR8J2Q8NGG1 315 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 OR4A15Q8NGL6 344 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 NEURL3Q96EH8 262 aa12.17□□□□□ -0.46
PRPF40A-211ENST00000493468 TRNT1Q96Q11 434 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms