RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 ZNF613Q6PF04 617 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 DTX2Q86UW9 622 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 IL17RDQ8NFM7 739 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 MAGEE2Q8TD90 523 aaPredicted RBP11.94□□□□□ -0.5
IRF1-210ENST00000493208 NANOS1Q8WY41 292 aaKnown RBP11.94□□□□□ -0.5
IRF1-210ENST00000493208 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 RHNO1Q9BSD3 238 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 TRAF4Q9BUZ4 470 aaPredicted RBP11.94□□□□□ -0.5
IRF1-210ENST00000493208 GID8Q9NWU2 228 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 AP3M1Q9Y2T2 418 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 NOX1Q9Y5S8 564 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 MTORP42345 2549 aa11.94□□□□□ -0.5
IRF1-210ENST00000493208 HRNRQ86YZ3 2850 aaPredicted RBP11.93□□□□□ -0.5
IRF1-210ENST00000493208 A0A087WUJ7 227 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 ZNF726A6NNF4 738 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 SHISA9B4DS77 424 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 PDLIM1O00151 329 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 RAMP1O60894 148 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 HIST1H2ABP04908 130 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 SOD3P08294 240 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 HOXB9P17482 250 aaPredicted RBP11.93□□□□□ -0.5
IRF1-210ENST00000493208 AQP1P29972 269 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 APOBEC3AP31941 199 aaPredicted RBP11.93□□□□□ -0.5
IRF1-210ENST00000493208 CLDN17P56750 224 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 OR1Q1Q15612 314 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 SEZ6L2Q6UXD5 910 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 HIST3H2AQ7L7L0 130 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 HDDC2Q7Z4H3 204 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 FAM169BQ8N8A8 192 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 IGFBPL1Q8WX77 278 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 PROX1Q92786 737 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 HIST1H2ACQ93077 130 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 MPP4Q96JB8 637 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 ZNF385AQ96PM9 386 aaKnown RBP11.93□□□□□ -0.5
IRF1-210ENST00000493208 ECSITQ9BQ95 431 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 CPPED1Q9BRF8 314 aaPredicted RBP11.93□□□□□ -0.5
IRF1-210ENST00000493208 TMEM43Q9BTV4 400 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 KATNB1Q9BVA0 655 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 SLAMF8Q9P0V8 285 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 FBXL3Q9UKT7 428 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 BAG5Q9UL15 447 aa11.93□□□□□ -0.5
IRF1-210ENST00000493208 TRBV5-3A0A0A0MS03 114 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 ARPC4-TTLL3A0A0A6YYG9 625 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 A0A0B4J2E0 115 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 A0A1B0GX12 115 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 FTCDNL1E5RQL4 147 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 CHP2O43745 196 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 CD247P20963 164 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 LSP1P33241 339 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 ARFIP2P53365 341 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 SNRPD2P62316 118 aaKnown RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 PMS2P3Q13401 168 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 TRMT5Q32P41 509 aaKnown RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 TTC33Q6PID6 262 aaPredicted RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 DLEU7Q6UYE1 221 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 MSRB3Q8IXL7 192 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 OR4F15Q8NGB8 312 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 OR1K1Q8NGR3 316 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 LILRB1Q8NHL6 650 aaPredicted RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 KTI12Q96EK9 354 aaPredicted RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 POM121Q96HA1 1249 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 ALKBH3Q96Q83 286 aaPredicted RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 MCHR1Q99705 422 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 SLC19A3Q9BZV2 496 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 POLR2J2Q9GZM3 115 aaKnown RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 POLR2J3Q9H1A7 115 aaKnown RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 GSX1Q9H4S2 264 aaPredicted RBP11.92□□□□□ -0.5
IRF1-210ENST00000493208 NPAP1Q9NZP6 1156 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 SPEF1Q9Y4P9 236 aa11.92□□□□□ -0.5
IRF1-210ENST00000493208 DSCAMO60469 2012 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 TRIM64A6NGJ6 449 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 TRIM64BA6NI03 449 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 RPL36A-HNRNPH2H7BZ11 118 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 M0R082 166 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 SLC22A2O15244 555 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 MFN2O95140 757 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 AHCYP23526 432 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 EDNRAP25101 427 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 GRPRP30550 384 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 PCGF2P35227 344 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 ARR3P36575 388 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 CDKN1AP38936 164 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 CAPZA2P47755 286 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 SELENOPP49908 381 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 HOXC5Q00444 222 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 ROR2Q01974 943 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 PUDPQ08623 228 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 PGGHGQ32M88 737 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 TBRG1Q3YBR2 411 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 OR8J3Q8NGG0 315 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 ZNF417Q8TAU3 575 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
IRF1-210ENST00000493208 LRR1Q96L50 414 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 SLC38A2Q96QD8 506 aa11.91□□□□□ -0.5
IRF1-210ENST00000493208 ZNF587Q96SQ5 575 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms