RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 GALNT11Q8NCW6 608 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 OR14L1PQ8NHC6 308 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 TMEM234Q8WY98 164 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 SNRNP40Q96DI7 357 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 BBC3Q96PG8 261 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 OR11A1Q9GZK7 315 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 WDR12Q9GZL7 423 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 POLR2J2Q9GZM3 115 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 POLR2J3Q9H1A7 115 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 TMED7Q9Y3B3 224 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 SVILO95425 2214 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 RP1L1Q8IWN7 2480 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 CIDEAO60543 219 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 RBBP9O75884 186 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 UQCRBP14927 111 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 FASP25445 335 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 APOBEC1P41238 236 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 EIF1P41567 113 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 POLR2HP52434 150 aaKnown RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 UGT2B15P54855 530 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 SPIBQ01892 262 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 KLRB1Q12918 225 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 EXOC3L2Q2M3D2 409 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 RAET1LQ5VY80 246 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 FGD2Q7Z6J4 655 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 PQLC1Q8N2U9 271 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 DACT3Q96B18 629 aaPredicted RBP8.44□□□□□ -1.06
CSTF1-206ENST00000493039 GPA33Q99795 319 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 GRIP2Q9C0E4 1043 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 TMEM185BQ9H7F4 350 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 C20orf141Q9NUB4 165 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 SPRR3Q9UBC9 169 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
CSTF1-206ENST00000493039 SH3PXD2BA1X283 911 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 NPIPA5E9PKD4 350 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 LINC01387J3KSC0 135 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 TNFRSF11BO00300 401 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 TFECO14948 347 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 ADAMDEC1O15204 470 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 SUSD5O60279 629 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 GADD45GO95257 159 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 LDLRP01130 860 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 PEPDP12955 493 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 ZNF17P17021 662 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 BMP7P18075 431 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 ATF4P18848 351 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 PRKACGP22612 351 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 LHX2P50458 406 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 SUCLG1P53597 346 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 CLDN20P56880 219 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 HSF1Q00613 529 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 LTBQ06643 244 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 TRAM2Q15035 370 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 FOXB2Q5VYV0 432 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 USP43Q70EL4 1123 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 GGNQ86UU5 652 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 CYP4Z1Q86W10 505 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 MEX3DQ86XN8 651 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 FAM98AQ8NCA5 519 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 PFN4Q8NHR9 129 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 NEIL3Q8TAT5 605 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 STMN2Q93045 179 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 KTI12Q96EK9 354 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 DNAJA3Q96EY1 480 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 CENPNQ96H22 339 aaPredicted RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 PIGQQ9BRB3 760 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 PTDSS2Q9BVG9 487 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 ANKRD19PQ9H560 264 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 STX18Q9P2W9 335 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 RPS6KB2Q9UBS0 482 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 CHRNA9Q9UGM1 479 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 NPIPA1Q9UND3 350 aa8.43□□□□□ -1.06
CSTF1-206ENST00000493039 SAMHD1Q9Y3Z3 626 aaKnown RBP8.43□□□□□ -1.06
CSTF1-206ENST00000493039 LRRN3E7EW58 273 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ACOT7O00154 380 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 DEAF1O75398 565 aaPredicted RBP8.42□□□□□ -1.06
CSTF1-206ENST00000493039 PNMTP11086 282 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 CXCR1P25024 350 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 GSSP48637 474 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 TDGF1P3P51864 188 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ALDH6A1Q02252 535 aaKnown RBP8.42□□□□□ -1.06
CSTF1-206ENST00000493039 SCRN3Q0VDG4 424 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 CTU2Q2VPK5 515 aaKnown RBP8.42□□□□□ -1.06
CSTF1-206ENST00000493039 FGD3Q5JSP0 725 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 VASNQ6EMK4 673 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 Q6ZNX1 250 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ZNF454Q8N9F8 522 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ATP6V1C2Q8NEY4 427 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 FNDC8Q8TC99 324 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 FAR1Q8WVX9 515 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 TMEM239Q8WW34 195 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ACOT11Q8WXI4 607 aaPredicted RBP8.42□□□□□ -1.06
CSTF1-206ENST00000493039 NR4A3Q92570 626 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 TAAR8Q969N4 342 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ADGRG7Q96K78 797 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 EPYCQ99645 322 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 KCNN2Q9H2S1 579 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 DCLRE1BQ9H816 532 aa8.42□□□□□ -1.06
CSTF1-206ENST00000493039 ASF1BQ9NVP2 202 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms