RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PLPP3O14495 311 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 CASKO14936 926 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 GSC2O15499 205 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 DIRAS1O95057 198 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 FABP3P05413 133 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 H1F0P07305 194 aaKnown RBP12.37□□□□□ -0.43
CCM2-217ENST00000492883 ADORA3P0DMS8 318 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 FUT1P19526 365 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 FUT4P22083 530 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 EDNRAP25101 427 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 CLDN17P56750 224 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 VLDLRP98155 873 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 PUDPQ08623 228 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 TRAP1Q12931 704 aaKnown RBP12.37□□□□□ -0.43
CCM2-217ENST00000492883 POU4F3Q15319 338 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 MS4A18Q3C1V0 323 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 ANKRD34AQ69YU3 496 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 LCN8Q6JVE9 175 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 ZNF730Q6ZMV8 503 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 Q6ZT83 130 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 CXorf67Q86X51 503 aaPredicted RBP12.37□□□□□ -0.43
CCM2-217ENST00000492883 EPHX4Q8IUS5 362 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 UEVLDQ8IX04 471 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 ADPRHL1Q8NDY3 354 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 PIK3C3Q8NEB9 887 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 FAM222BQ8WU58 562 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 TMEM45BQ96B21 275 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 PIP5K1AQ99755 562 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 HDHD5Q9BXW7 423 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 TRIM15Q9C019 465 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 C20orf141Q9NUB4 165 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 KCNN3Q9UGI6 736 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 GPR52Q9Y2T5 361 aa12.37□□□□□ -0.43
CCM2-217ENST00000492883 DIDO1Q9BTC0 2240 aaKnown RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 C11orf98E9PRG8 122 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 BLOC1S5-TXNDC5H3BN57 136 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 SERPINI2O75830 405 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 KRT33AO76009 404 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 OR7A10O76100 309 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 PRSS23O95084 383 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 CNOT4O95628 575 aaKnown RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 IGF2P01344 180 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 SEMG1P04279 462 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 EPXP11678 715 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 IFI30P13284 250 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 SMIM11AP58511 58 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 P2RY6Q15077 328 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 FAM98BQ52LJ0 330 aaKnown RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 FGD3Q5JSP0 725 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 NIPAL3Q6P499 406 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 STAC2Q6ZMT1 411 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 NRMQ8IXM6 262 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 CDK20Q8IZL9 346 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 RNF113BQ8IZP6 322 aaKnown RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 OR52J3Q8NH60 311 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 ACOT11Q8WXI4 607 aaPredicted RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 POP5Q969H6 163 aaKnown RBP12.36□□□□□ -0.43
CCM2-217ENST00000492883 DACH2Q96NX9 599 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 WFIKKN1Q96NZ8 548 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 ZNF347Q96SE7 839 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 MED18Q9BUE0 208 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 ANKRD19PQ9H560 264 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 IL1RAPQ9NPH3 570 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 MAN2C1Q9NTJ4 1040 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 ASB6Q9NWX5 421 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 B3GAT1Q9P2W7 334 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 TESMINQ9Y4I5 508 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 NOX1Q9Y5S8 564 aa12.36□□□□□ -0.43
CCM2-217ENST00000492883 A0A087WUU8 490 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 TCRBV5S2A0A599 114 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 SH3D21A4FU49 640 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ZNF726A6NNF4 738 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ACOT8O14734 319 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 RNF13O43567 381 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 AKAP8O43823 692 aaKnown RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 PIP5K1CO60331 668 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 HPRP00739 348 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 PSMB1P20618 241 aaKnown RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 IL32P24001 234 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 SELENOPP49908 381 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCM2-217ENST00000492883 SPIBQ01892 262 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 POU3F1Q03052 451 aaPredicted RBP12.35□□□□□ -0.43
CCM2-217ENST00000492883 CHRNB3Q05901 458 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 FAPQ12884 760 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 ITGADQ13349 1161 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 DGCR6Q14129 220 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 TSC22D1Q15714 1073 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 TSPO2Q5TGU0 170 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 PGM2L1Q6PCE3 622 aa12.35□□□□□ -0.43
CCM2-217ENST00000492883 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms