RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 LTBQ06643 244 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 METTL21CQ5VZV1 264 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 KLHL24Q6TFL4 600 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 RANBP3LQ86VV4 465 aaPredicted RBP13.14□□□□□ -0.31
TOM1-215ENST00000491987 TRMT61AQ96FX7 289 aaKnown RBP13.14□□□□□ -0.31
TOM1-215ENST00000491987 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
TOM1-215ENST00000491987 FAIMQ9NVQ4 179 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 KLHL14Q9P2G3 628 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 A0A087WUJ7 227 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 A0A0B4J2E0 115 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 A0A1B0GX12 115 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 M0QX08 132 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 FBP2O00757 339 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 FZD7O75084 574 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 UPK3AO75631 287 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 CD8AP01732 235 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 HEXAP06865 529 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 CDH12P55289 794 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 PRPS1P60891 318 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 C1DQ13901 141 aaKnown RBP13.13□□□□□ -0.31
TOM1-215ENST00000491987 DUSP7Q16829 419 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 B3GLCTQ6Y288 498 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 LINGO2Q7L985 606 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 NET1Q7Z628 596 aaPredicted RBP13.13□□□□□ -0.31
TOM1-215ENST00000491987 DTX2Q86UW9 622 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 GPR32P1Q8NGA4 272 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 OR1K1Q8NGR3 316 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 MCHR1Q99705 422 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 ZNF446Q9NWS9 450 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 B3GAT1Q9P2W7 334 aa13.13□□□□□ -0.31
TOM1-215ENST00000491987 OR6C65A6NJZ3 312 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 FAM171A2A8MVW0 826 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 NDUFS7O75251 213 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 WNT11O96014 354 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 NQO1P15559 274 aaKnown RBP13.12□□□□□ -0.31
TOM1-215ENST00000491987 PCGF2P35227 344 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 ARFIP2P53365 341 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 VEZF1Q14119 521 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 NPTX1Q15818 432 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 CLEC12BQ2HXU8 276 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 TRMT5Q32P41 509 aaKnown RBP13.12□□□□□ -0.31
TOM1-215ENST00000491987 TBRG1Q3YBR2 411 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 CGB2Q6NT52 195 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 OR10A6Q8NH74 314 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 OXGR1Q96P68 337 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 ARHGDIGQ99819 225 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 EVA1AQ9H8M9 152 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 GDF2Q9UK05 429 aaPredicted RBP13.12□□□□□ -0.31
TOM1-215ENST00000491987 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 B3GALT5Q9Y2C3 310 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 ATP23Q9Y6H3 246 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 ARID1AO14497 2285 aa13.12□□□□□ -0.31
TOM1-215ENST00000491987 CPSF4LA6NMK7 179 aaKnown RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 LRRN3E7EW58 273 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 SLC43A1O75387 559 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 ZNF432O94892 652 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 IGHV4-39P01824 125 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 BGLAPP02818 100 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 TTKP33981 857 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 ACVR1BP36896 505 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 FABP6P51161 128 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 ROR2Q01974 943 aaKnown RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 TNK1Q13470 666 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 NRF1Q16656 503 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 REP15Q6BDI9 236 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 H1FNTQ75WM6 255 aaPredicted RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 PATL1Q86TB9 770 aaKnown RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 RBM45Q8IUH3 476 aaKnown RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 SLC30A8Q8IWU4 369 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 C10orf53Q8N6V4 93 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 ADPRHL1Q8NDY3 354 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 OR4D11Q8NGI4 311 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 VANGL1Q8TAA9 524 aaPredicted RBP13.11□□□□□ -0.31
TOM1-215ENST00000491987 HS6ST2Q96MM7 605 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 EPYCQ99645 322 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
TOM1-215ENST00000491987 A0A096LPE4 126 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 A0A1W2PPZ6 126 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 ATP6V1G2-DDX39BF2Z307 99 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 TRAF3IP2O43734 574 aaPredicted RBP13.1□□□□□ -0.31
TOM1-215ENST00000491987 FMO6PO60774 539 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 HPRP00739 348 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 C8BP07358 591 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 CD247P20963 164 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 GZMMP51124 257 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
TOM1-215ENST00000491987 TUBA1BP68363 451 aa13.1□□□□□ -0.31
TOM1-215ENST00000491987 TUBA4AP68366 448 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms