RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 SHQ1Q6PI26 577 aaKnown RBP12.53□□□□□ -0.4
SSR4-212ENST00000491833 SPATA21Q7Z572 469 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 RIMKLAQ8IXN7 391 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 CLECL1Q8IZS7 167 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 SVOPLQ8N434 492 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 UBASH3BQ8TF42 649 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 ANKRD27Q96NW4 1050 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 PIF1Q9H611 641 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 MRGBPQ9NV56 204 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 KLHL14Q9P2G3 628 aa12.53□□□□□ -0.4
SSR4-212ENST00000491833 NUP214P35658 2090 aaPredicted RBP12.52□□□□□ -0.4
SSR4-212ENST00000491833 ZC3H12DA2A288 527 aaKnown RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 AQP7P3A6NL99 342 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 CLDN24A6NM45 220 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 AP3D1O14617 1153 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 AKR7A3O95154 331 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 UQCRBP14927 111 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 TACR3P29371 465 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 S100A3P33764 101 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 KHKP50053 298 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 TUBA1BP68363 451 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 TUBA4AP68366 448 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 IL1RL1Q01638 556 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 OR4F3Q6IEY1 312 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 TNFAIP8L2Q6P589 184 aaPredicted RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 TUBA1AQ71U36 451 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 HMGN2P46Q86SG4 172 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 LSRQ86X29 649 aaPredicted RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 TMEM99Q8N816 258 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 ZIC4Q8N9L1 334 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 OR4A15Q8NGL6 344 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 MAGEE2Q8TD90 523 aaPredicted RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 XAGE5Q8WWM1 108 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.41
SSR4-212ENST00000491833 ROPN1LQ96C74 230 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 SEC61A2Q9H9S3 476 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 ZIM2Q9NZV7 527 aa12.52□□□□□ -0.41
SSR4-212ENST00000491833 TMEM89A2RUT3 159 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 OR6C65A6NJZ3 312 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 FAM157AC9JC47 383 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 NR5A2O00482 541 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 RNASET2O00584 256 aaKnown RBP12.51□□□□□ -0.41
SSR4-212ENST00000491833 SLC22A3O75751 556 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 IGKV3-15P01624 115 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 THBS4P35443 961 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 SH3BGRP55822 239 aaPredicted RBP12.51□□□□□ -0.41
SSR4-212ENST00000491833 CEACAM7Q14002 265 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 OR7A5Q15622 319 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 GPAT3Q53EU6 434 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 ANXA8L1Q5VT79 327 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 AP1ARQ63HQ0 302 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 CMIPQ8IY22 773 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 CDK20Q8IZL9 346 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 FAM169BQ8N8A8 192 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 CNOT9Q92600 299 aaKnown RBP12.51□□□□□ -0.41
SSR4-212ENST00000491833 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
SSR4-212ENST00000491833 RAB8BQ92930 207 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 DOK1Q99704 481 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 GRIP1Q9Y3R0 1128 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 SPEF1Q9Y4P9 236 aa12.51□□□□□ -0.41
SSR4-212ENST00000491833 A0A096LPE4 126 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 SH3PXD2BA1X283 911 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 GMNCA6NCL1 334 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 LIPT2A6NK58 231 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 FAAHO00519 579 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 SCN2BO60939 215 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 SELENOPP49908 381 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 HILS1P60008 231 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 UFM1P61960 85 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 HGFACQ04756 655 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 TMEM225Q6GV28 225 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 NIPAL3Q6P499 406 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 MYPOPQ86VE0 399 aaPredicted RBP12.5□□□□□ -0.41
SSR4-212ENST00000491833 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 TMEM186Q96B77 213 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 TESCQ96BS2 214 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 RBM4Q9BWF3 364 aaKnown RBP12.5□□□□□ -0.41
SSR4-212ENST00000491833 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 TPK1Q9H3S4 243 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 RMND5AQ9H871 391 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 HIF1ANQ9NWT6 349 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 PCDHB10Q9UN67 800 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 GPR45Q9Y5Y3 372 aa12.5□□□□□ -0.41
SSR4-212ENST00000491833 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
SSR4-212ENST00000491833 LYNX1G3V0Z9 82 aa12.49□□□□□ -0.41
SSR4-212ENST00000491833 RGS9O75916 674 aaPredicted RBP12.49□□□□□ -0.41
SSR4-212ENST00000491833 VAMP5O95183 116 aa12.49□□□□□ -0.41
SSR4-212ENST00000491833 ANP32DO95626 131 aa12.49□□□□□ -0.41
SSR4-212ENST00000491833 CPSF4O95639 269 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms