RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 CRHBPP24387 322 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 SRD5A2P31213 254 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 RPL4P36578 427 aaKnown RBP12.15□□□□□ -0.46
NUP188-208ENST00000491502 FOXF1Q12946 379 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 OCLNQ16625 522 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 CLEC12AQ5QGZ9 265 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 TMEM236Q5W0B7 351 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 ARSKQ6UWY0 536 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
NUP188-208ENST00000491502 GTPBP8Q8N3Z3 284 aaPredicted RBP12.15□□□□□ -0.46
NUP188-208ENST00000491502 LNX2Q8N448 690 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 ZNF540Q8NDQ6 660 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 OR13C2Q8NGS9 318 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 TMEM163Q8TC26 289 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 TNFRSF13CQ96RJ3 184 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 UBQLN3Q9H347 655 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 FN3KQ9H479 309 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 ZFP64Q9NPA5 681 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 KLHL21Q9UJP4 597 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.46
NUP188-208ENST00000491502 RPL36Q9Y3U8 105 aaKnown RBP12.15□□□□□ -0.46
NUP188-208ENST00000491502 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TRAV27A0A087WT01 109 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TRGV8A0A0C4DH27 118 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 ACOT7O00154 380 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 IMPA2O14732 288 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 SLC19A2O60779 497 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 NPIPB7O75200 414 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 ASAH2BP0C7U1 165 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TFPIP10646 304 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 PEPDP12955 493 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 APEHP13798 732 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 ZNF3P17036 446 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 IDUAP35475 653 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 CA7P43166 264 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 RPL5P46777 297 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 RPS5P46782 204 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 NR1H2P55055 460 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 GPR85P60893 370 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 PLGLB1Q02325 96 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 EGR4Q05215 589 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 CTU2Q2VPK5 515 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 RNFT1Q5M7Z0 435 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TMEM201Q5SNT2 666 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 C1QL3Q5VWW1 255 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 SLC46A3Q7Z3Q1 461 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 FJX1Q86VR8 437 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 SLC22A16Q86VW1 577 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 MEX3DQ86XN8 651 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 SVOPQ8N4V2 548 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TCEANCQ8N8B7 351 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 SCAIQ8N9R8 606 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 OR2M7Q8NG81 312 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 OR5J2Q8NH18 312 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 MFSD8Q8NHS3 518 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 CNIH3Q8TBE1 160 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 GPX7Q96SL4 187 aaPredicted RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 PLA2G12AQ9BZM1 189 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 TSPAN10Q9H1Z9 355 aaPredicted RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 DEPPQ9NTK1 212 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 ZNF226Q9NYT6 803 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 CNOT2Q9NZN8 540 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 FBXL2Q9UKC9 423 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.14□□□□□ -0.47
NUP188-208ENST00000491502 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 HDGFL3Q9Y3E1 203 aa12.14□□□□□ -0.47
NUP188-208ENST00000491502 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
NUP188-208ENST00000491502 DIDO1Q9BTC0 2240 aaKnown RBP12.13□□□□□ -0.47
NUP188-208ENST00000491502 TRIM64A6NGJ6 449 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 CLCA1A8K7I4 914 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 BLOC1S5-TXNDC5H3BN57 136 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 ARPC3O15145 178 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 SURF4O15260 269 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 WISP2O76076 250 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 BGLAPP02818 100 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 IGFBP1P08833 259 aaPredicted RBP12.13□□□□□ -0.47
NUP188-208ENST00000491502 ABOP16442 354 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 GABRB1P18505 474 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 PTNP21246 168 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 FMO3P31513 532 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 RPS4XP62701 263 aaKnown RBP12.13□□□□□ -0.47
NUP188-208ENST00000491502 PPIAP62937 165 aaKnown RBP12.13□□□□□ -0.47
NUP188-208ENST00000491502 PMS2P3Q13401 168 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 TMED1Q13445 227 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 TOMM20Q15388 145 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 SGCBQ16585 318 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 ALG10Q5BKT4 473 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 EMC4Q5J8M3 183 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 ACSM5Q6NUN0 579 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 ZNF773Q6PK81 442 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 CCDC71Q8IV32 467 aaPredicted RBP12.13□□□□□ -0.47
NUP188-208ENST00000491502 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 OR8D4Q8NGM9 314 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 TAAR8Q969N4 342 aa12.13□□□□□ -0.47
NUP188-208ENST00000491502 SLC25A36Q96CQ1 311 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms