RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ZIC1Q15915 447 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ODF2Q5BJF6 829 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ZNF789Q5FWF6 425 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TFDP3Q5H9I0 405 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ANKRD20A2Q5SQ80 823 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ANKRD20A1Q5TYW2 823 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ANKRD20A3Q5VUR7 823 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 KCTD11Q693B1 232 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 GLT6D1Q7Z4J2 308 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SNX20Q7Z614 316 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 PIANPQ8IYJ0 282 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 CCDC170Q8IYT3 715 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 OR4E2Q8NGC2 313 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 OR13C4Q8NGS5 318 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ACTL9Q8TC94 416 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 HEXDCQ8WVB3 486 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 LCN9Q8WX39 176 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ULK4Q96C45 1275 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 HAUS1Q96CS2 278 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 DCUN1D1Q96GG9 259 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 RMDN2Q96LZ7 410 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 C12orf66Q96MD2 445 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SPATA13Q96N96 652 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 COPS8Q99627 209 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 NRTNQ99748 197 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 C19orf43Q9BQ61 176 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 CCM2Q9BSQ5 444 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 FICDQ9BVA6 458 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 NLNQ9BYT8 704 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 OSBPL8Q9BZF1 889 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 WWP1Q9H0M0 922 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 ING2Q9H160 280 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 GBA3Q9H227 469 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 OR52A5Q9H2C5 316 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SRMSQ9H3Y6 488 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 FN3KQ9H479 309 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TSPY26PQ9H489 355 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 FAM96AQ9H5X1 160 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 IMP3Q9NV31 184 aaKnown RBP2.44□□□□□ -2.02
PHC3-213ENST00000491258 PSMD13Q9UNM6 376 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 BTRCQ9Y297 605 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 TP53TG5Q9Y2B4 290 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.44□□□□□ -2.02
PHC3-213ENST00000491258 SPTA1P02549 2419 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 UBR4Q5T4S7 5183 aa2.44□□□□□ -2.02
PHC3-213ENST00000491258 KNL1Q8NG31 2342 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 TICRRQ7Z2Z1 1910 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 ARGFXA6NJG6 315 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 BTNL10A8MVZ5 291 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 TMEM150CB9EJG8 249 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 H3BMH7 237 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 H7C0S8 307 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CCL22O00626 93 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 LIN7AO14910 233 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 HCRTR1O43613 425 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 KIF5CO60282 957 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 OR1I1O60431 355 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 SCRG1O75711 98 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 KLF7O75840 302 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 KLK3P07288 261 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 SLC35G4P0C7Q5 338 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 TPBGLP0DKB5 382 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 RALBP11234 206 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PVRP15151 417 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 CTNNA2P26232 953 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PSMB4P28070 264 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PBLDP30039 288 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 GABRA4P48169 554 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PRLHRP49683 370 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 RWDD2BP57060 319 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 RPS15P62841 145 aaKnown RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 OTUD4Q01804 1114 aaKnown RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 PLOD1Q02809 727 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 MZT1Q08AG7 82 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 ABRQ12979 859 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 RPA4Q13156 261 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PRPSAP1Q14558 356 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 ABRAXAS2Q15018 415 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 KIAA0040Q15053 153 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 SPA17Q15506 151 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 PARP6Q2NL67 630 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 NADK2Q4G0N4 442 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CST9LP1Q5W188 147 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 REP15Q6BDI9 236 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 TAS2R42Q7RTR8 314 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 SYVN1Q86TM6 617 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 SERPINA9Q86WD7 417 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 OOSP2Q86WS3 158 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 TMEM126BQ8IUX1 230 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CROCCP3Q8IVE0 287 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CCDC50Q8IVM0 306 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CDKL3Q8IVW4 592 aaPredicted RBP2.43□□□□□ -2.02
PHC3-213ENST00000491258 FAM219AQ8IW50 185 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CLDN19Q8N6F1 224 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 Q8N9L7 120 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 OR52E1Q8NGJ3 308 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 OR6F1Q8NGZ6 308 aa2.43□□□□□ -2.02
PHC3-213ENST00000491258 CCDC110Q8TBZ0 833 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms