RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TBC1D25Q3MII6 688 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 TMEM176BQ3YBM2 270 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 RPL13AP3Q6NVV1 102 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 H3F3CQ6NXT2 135 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 DPY19L2P2Q6ZN68 376 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 SVOPQ8N4V2 548 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 RFLNBQ8N5W9 214 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 LRRC75AQ8NAA5 344 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 ST8SIA1Q92185 356 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 COG8Q96MW5 612 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 OR5B2Q96R09 309 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 TEAD3Q99594 435 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 RNF167Q9H6Y7 350 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 CNOT2Q9NZN8 540 aaKnown RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 A0A1W2PPW3 197 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 PYCR1P32322 319 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 PRPS1P60891 318 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 TEKQ02763 1124 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 MYBPHQ13203 477 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 FADS6Q8N9I5 356 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 NPEPL1Q8NDH3 523 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 KISS1RQ969F8 398 aaPredicted RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 C5orf34Q96MH7 638 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 SECISBP2Q96T21 854 aaKnown RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 PTGES2Q9H7Z7 377 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
SMPD4-219ENST00000491128 CSAG2Q9Y5P2 127 aa12.55□□□□□ -0.4
SMPD4-219ENST00000491128 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 RPS27P42677 84 aaKnown RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 VBP1P61758 197 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 RUNX1T1Q06455 604 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 IRF3Q14653 427 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ARMCX4Q5H9R4 360 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 SLC25A30Q5SVS4 291 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 SYT6Q5T7P8 510 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 SLC16A12Q6ZSM3 486 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 MEPCEQ7L2J0 689 aaKnown RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 OR6K6Q8NGW6 343 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 FKRPQ9H9S5 495 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF229Q9UJW7 825 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 KLK13Q9UKR3 277 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 SLC6A5Q9Y345 797 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 IGHV3-15A0A0B4J1V0 119 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ZNF814B7Z6K7 855 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 PROB1E7EW31 1015 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ARHGEF9O43307 516 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ZIC3O60481 467 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 RAMP1O60894 148 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 TRAPPC6AO75865 159 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 NEURL1O76050 574 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 RAB36O95755 333 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CD14P08571 375 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CD36P16671 472 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 HTR1FP30939 366 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CCL11P51671 97 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 AQP6Q13520 282 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 TBCEQ15813 527 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 TSTQ16762 297 aaKnown RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 MESTQ5EB52 335 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ARHGAP11AQ6P4F7 1023 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
SMPD4-219ENST00000491128 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CDCA4Q9BXL8 241 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 C12orf10Q9HB07 376 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CPNE5Q9HCH3 593 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 MED29Q9NX70 200 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 NDUFA13Q9P0J0 144 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 GRHPRQ9UBQ7 328 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 DKKL1Q9UK85 242 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CPAMD8Q8IZJ3 1885 aa12.54□□□□□ -0.4
SMPD4-219ENST00000491128 CCDC182A6NF36 153 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 GFRA3O60609 400 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 LIPCP11150 499 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 DCKP27707 260 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 MSX1P28360 303 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 HTR3AP46098 478 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 FOXC1Q12948 553 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TUBA3CQ13748 450 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 RSPO4Q2I0M5 234 aaPredicted RBP12.53□□□□□ -0.4
SMPD4-219ENST00000491128 UBE2UQ5VVX9 321 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 TUBA3EQ6PEY2 450 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 UBQLNLQ8IYU4 475 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 OR10H4Q8NGA5 316 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 FRMD6Q96NE9 622 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 MGLLQ99685 303 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
SMPD4-219ENST00000491128 SYT4Q9H2B2 425 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms