RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TUBA1CQ9BQE3 449 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 SF3B5Q9BWJ5 86 aaKnown RBP9.81□□□□□ -0.84
VARS2-210ENST00000490699 CALHM2Q9HA72 323 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 INIPQ9NRY2 104 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 PNPLA3Q9NST1 481 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 USE1Q9NZ43 259 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 BAIAP2Q9UQB8 552 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 HIF3AQ9Y2N7 669 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 CDH10Q9Y6N8 788 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 USP24Q9UPU5 2620 aa9.81□□□□□ -0.84
VARS2-210ENST00000490699 PIEZO2Q9H5I5 2752 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 TRAV27A0A087WT01 109 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 A0A1W2PNV4 684 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 CD8B2A6NJW9 211 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 B8ZZF3 427 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 FTCDNL1E5RQL4 147 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 C11orf98E9PRG8 122 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 H0YC42 278 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 PLPP3O14495 311 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 SERPINI2O75830 405 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 WISP1O95388 367 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 IL2RAP01589 272 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 ALPLP05186 524 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 NR2C1P13056 603 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 VHLP40337 213 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 AGFG1P52594 562 aaKnown RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 TPD52P55327 224 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 PPP2R2BQ00005 443 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 RASGEF1BQ0VAM2 473 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 ACSF3Q4G176 576 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 OGFRL1Q5TC84 451 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 FBXW10Q5XX13 1052 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 FAM205BPQ63HN1 556 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 LPCAT4Q643R3 524 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 KDM4DQ6B0I6 523 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 TMEM211Q6ICI0 200 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 B3GNT6Q6ZMB0 384 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 ZNF620Q6ZNG0 422 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 GALNT5Q7Z7M9 940 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 MEX3DQ86XN8 651 aaKnown RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 EPHX4Q8IUS5 362 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 GALNT4Q8N4A0 578 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 OR2T33Q8NG76 320 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 ZNF775Q96BV0 537 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 ZNF845Q96IR2 970 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 PLEKHA8Q96JA3 519 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 ZFP3Q96NJ6 502 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 OXGR1Q96P68 337 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 SLC38A2Q96QD8 506 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 NIPSNAP1Q9BPW8 284 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 IFT27Q9BW83 186 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 POLDIP3Q9BY77 421 aaKnown RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 SRXN1Q9BYN0 137 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 OR52D1Q9H346 318 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 RIBC2Q9H4K1 309 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 SMURF2Q9HAU4 748 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 GP6Q9HCN6 339 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 SMPD3Q9NY59 655 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 GRHPRQ9UBQ7 328 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 NKX1-2Q9UD57 310 aaPredicted RBP9.8□□□□□ -0.84
VARS2-210ENST00000490699 EMC9Q9Y3B6 208 aa9.8□□□□□ -0.84
VARS2-210ENST00000490699 MPDZO75970 2070 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 IGHV3-15A0A0B4J1V0 119 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 TRGV8A0A0C4DH27 118 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 ZNF726A6NNF4 738 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 LRRN3E7EW58 273 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 M0R3G1 203 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 SOCS2O14508 198 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 XKRYO14609 159 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 CDC42EP2O14613 210 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 CYTIPO60759 359 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 SOX14O95416 240 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 IFNGP01579 166 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 AQP2P41181 271 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 PTDSS1P48651 473 aaKnown RBP9.79□□□□□ -0.84
VARS2-210ENST00000490699 DAPP51397 102 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 SMSP52788 366 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 RPS4XP62701 263 aaKnown RBP9.79□□□□□ -0.84
VARS2-210ENST00000490699 POU3F1Q03052 451 aaPredicted RBP9.79□□□□□ -0.84
VARS2-210ENST00000490699 RPL18Q07020 188 aaKnown RBP9.79□□□□□ -0.84
VARS2-210ENST00000490699 C19orf57Q0VDD7 668 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 ZP4Q12836 540 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 PDK3Q15120 406 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 SLC36A3Q495N2 470 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 EEF1A1P5Q5VTE0 462 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 NSUN5P2Q63ZY6 315 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 GPR139Q6DWJ6 353 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 SLC27A4Q6P1M0 643 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 MTFR2Q6P444 385 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 KLHL17Q6TDP4 642 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 CASP12Q6UXS9 341 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 DPY19L2P2Q6ZN68 376 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 PXKQ7Z7A4 578 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 LRRC17Q8N6Y2 441 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 TMEM99Q8N816 258 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 GALNT11Q8NCW6 608 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 FNDC9Q8TBE3 224 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 RNF128Q8TEB7 428 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
VARS2-210ENST00000490699 TNFRSF13CQ96RJ3 184 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms