RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 SLCO5A1Q9H2Y9 848 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 ARMC7Q9H6L4 198 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 EFCAB1Q9HAE3 211 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 CACYBPQ9HB71 228 aaKnown RBP9.14□□□□□ -0.95
TTC28-207ENST00000490475 MOV10Q9HCE1 1003 aaKnown RBP9.14□□□□□ -0.95
TTC28-207ENST00000490475 CMTM6Q9NX76 183 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 TMEM181Q9P2C4 612 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 MALT1Q9UDY8 824 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 OSGIN1Q9UJX0 560 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 ING1Q9UK53 422 aaPredicted RBP9.14□□□□□ -0.95
TTC28-207ENST00000490475 POU2F3Q9UKI9 436 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 SLC9A8Q9Y2E8 581 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 SONP18583 2426 aaKnown RBP9.14□□□□□ -0.95
TTC28-207ENST00000490475 ATRQ13535 2644 aa9.14□□□□□ -0.95
TTC28-207ENST00000490475 TMED7-TICAM2A0A0A6YYA0 188 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 DPRXA6NFQ7 191 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 INAFM1C9JVW0 142 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 ABCD4O14678 606 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 SERPINB7O75635 380 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 OPN1SWP03999 348 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 IGHV1-2P23083 117 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 PRKAR1BP31321 381 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 POLR2HP52434 150 aaKnown RBP9.13□□□□□ -0.95
TTC28-207ENST00000490475 CDH11P55287 796 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 PCBP3P57721 371 aaKnown RBP9.13□□□□□ -0.95
TTC28-207ENST00000490475 TSC22D1Q15714 1073 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 DUSP7Q16829 419 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 VMACQ2NL98 169 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 ZNF544Q6NX49 715 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 DHRS4L2Q6PKH6 230 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 ARMC8Q8IUR7 673 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 FBXL14Q8N1E6 418 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 CADM2Q8N3J6 435 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 KBTBD8Q8NFY9 601 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 CMTM5Q96DZ9 223 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 ZNF300Q96RE9 604 aaPredicted RBP9.13□□□□□ -0.95
TTC28-207ENST00000490475 TRAF4Q9BUZ4 470 aaPredicted RBP9.13□□□□□ -0.95
TTC28-207ENST00000490475 SPATA5L1Q9BVQ7 753 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 OR11A1Q9GZK7 315 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 FKRPQ9H9S5 495 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 CBLN4Q9NTU7 201 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 UPB1Q9UBR1 384 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 PRSS50Q9UI38 385 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 ANGPT4Q9Y264 503 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 AMDHD2Q9Y303 409 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 TMED7Q9Y3B3 224 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 RTTNQ86VV8 2226 aa9.13□□□□□ -0.95
TTC28-207ENST00000490475 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 TMEM72A0PK05 275 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PRORSD1PA6NEY8 169 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 OR6C65A6NJZ3 312 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 ZNF716A6NP11 495 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 SHISA9B4DS77 424 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 RNF223E7ERA6 249 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 TPST2O60704 377 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 WNT11O96014 354 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 CSF3P09919 207 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 ACADSP16219 412 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 CXCR1P25024 350 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PCGF2P35227 344 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 COPZ1P61923 177 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 CHRNB3Q05901 458 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 FAPQ12884 760 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 BNIP2Q12982 314 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 BLMHQ13867 455 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PGGHGQ32M88 737 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 WBP2NLQ6ICG8 309 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PODNL1Q6PEZ8 512 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 SLC22A25Q6T423 547 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PAQR6Q6TCH4 344 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 KLHL24Q6TFL4 600 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 CLEC2AQ6UVW9 174 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 PATL1Q86TB9 770 aaKnown RBP9.12□□□□□ -0.95
TTC28-207ENST00000490475 SLC15A3Q8IY34 581 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 POMGNT2Q8NAT1 580 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 GPR32P1Q8NGA4 272 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 ARL5BQ96KC2 179 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 MUS81Q96NY9 551 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 DHRS9Q9BPW9 319 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 SF3B5Q9BWJ5 86 aaKnown RBP9.12□□□□□ -0.95
TTC28-207ENST00000490475 OBP2BQ9NPH6 170 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 ARL8BQ9NVJ2 186 aa9.12□□□□□ -0.95
TTC28-207ENST00000490475 FBXO9Q9UK97 447 aaPredicted RBP9.12□□□□□ -0.95
TTC28-207ENST00000490475 ZC3H12DA2A288 527 aaKnown RBP9.11□□□□□ -0.95
TTC28-207ENST00000490475 CD5LO43866 347 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 RAD51DO75771 328 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 VAMP5O95183 116 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 GPIP06744 558 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 CD247P20963 164 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 CD40P25942 277 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 HTR2AP28223 471 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 PRDX6P30041 224 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 TTKP33981 857 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 ACVR1BP36896 505 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 CDKN1AP38936 164 aa9.11□□□□□ -0.95
TTC28-207ENST00000490475 NUDT2P50583 147 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms