RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 B3GALT5Q9Y2C3 310 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A087WUJ7 227 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A096LNT2 108 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 ARPC4-TTLL3A0A0A6YYG9 625 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A1B0GWA3 101 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 OR2T1O43869 369 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 EDF1O60869 148 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 NDUFS7O75251 213 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 MFN2O95140 757 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 PNMTP11086 282 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF83P51522 516 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 PRPS1P60891 318 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 HOXC5Q00444 222 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 SPOCK1Q08629 439 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 LAPTM4AQ15012 233 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 C3orf36Q3SXR2 165 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 AGKQ53H12 422 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 ARFGEF3Q5TH69 2177 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 AGAP6Q5VW22 663 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 METTL21CQ5VZV1 264 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 FAM91A1Q658Y4 838 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 ZNF544Q6NX49 715 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 PTOV1Q86YD1 416 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 OR10H5Q8NGA6 315 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 NFKBIDQ8NI38 313 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 DNAJA4Q8WW22 397 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC38A4Q969I6 547 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 TAAR8Q969N4 342 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 WFDC6Q9BQY6 131 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 TAPBPLQ9BX59 468 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 NELFAQ9H3P2 528 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 EVA1AQ9H8M9 152 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 CBLN4Q9NTU7 201 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 CRNNQ9UBG3 495 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 UPB1Q9UBR1 384 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 RCE1Q9Y256 329 aa8.5□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A1W2PR80 420 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 PRORSD1PA6NEY8 169 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 H7C417 338 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 NR5A2O00482 541 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 AHSA1O95433 338 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 IGLV1-44P01699 117 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 NCF2P19878 526 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ACVR1BP36896 505 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 CDKN1AP38936 164 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 SELENOPP49908 381 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 GZMMP51124 257 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 CDH11P55287 796 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 LGALS3BPQ08380 585 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 NRF1Q16656 503 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 MST1LQ2TV78 715 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ULK3Q6PHR2 472 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC22A25Q6T423 547 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ABHD12BQ7Z5M8 362 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 KRT73Q86Y46 540 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ADPRHL1Q8NDY3 354 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 BHLHE22Q8NFJ8 381 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 OR1K1Q8NGR3 316 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ANKRD27Q96NW4 1050 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 OXGR1Q96P68 337 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 SPATA5L1Q9BVQ7 753 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 REG4Q9BYZ8 158 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 FGFR1OP2Q9NVK5 253 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ADPRHL2Q9NX46 363 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 KLHL14Q9P2G3 628 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 GDF2Q9UK05 429 aaPredicted RBP8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 CORO2BQ9UQ03 480 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 ATRQ13535 2644 aa8.49□□□□□ -1.05
TMEM39A-210ENST00000490099 TRAV36DV7A0A075B6V5 113 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A0B4J2E0 115 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 A0A1B0GX12 115 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 ELOA3DA6NLF2 546 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 EVPLLA8MZ36 301 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 C5orf58C9J3I9 102 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 MS4A18H0YCH9 400 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 J3QL48 77 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 M0R1B8 84 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SMAD7O15105 426 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 TRAF3IP2O43734 574 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 FMO6PO60774 539 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 UPK3AO75631 287 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SERPINB7O75635 380 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 LYPD3O95274 346 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 LGI1O95970 557 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 FAM107AO95990 144 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 C8BP07358 591 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SLC6A2P23975 617 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 RPS5P46782 204 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SH3BGRP55822 239 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 CBX1P83916 185 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 DMTNQ08495 405 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 RBBP4Q09028 425 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SCARB2Q14108 478 aa8.48□□□□□ -1.05
TMEM39A-210ENST00000490099 SWI5Q1ZZU3 235 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms