RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SRD5A1P18405 259 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 THBS2P35442 1172 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 PPOXP50336 477 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 EFNB3Q15768 340 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 KRTAP24-1Q3LI83 254 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 ANKRD16Q6P6B7 361 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 VHLLQ6RSH7 139 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 MSANTD1Q6ZTZ1 278 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 MFSD8Q8NHS3 518 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 VPS33AQ96AX1 596 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 MSI2Q96DH6 328 aaKnown RBP16.01■□□□□ 0.15
HDAC6-231ENST00000488905 MAELQ96JY0 434 aaKnown RBP16.01■□□□□ 0.15
HDAC6-231ENST00000488905 PTDSS2Q9BVG9 487 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 PLK3Q9H4B4 646 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 RMND5AQ9H871 391 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 SEC61A2Q9H9S3 476 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 THUMPD1Q9NXG2 353 aaKnown RBP16.01■□□□□ 0.15
HDAC6-231ENST00000488905 ZIM2Q9NZV7 527 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 RCE1Q9Y256 329 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 IFT52Q9Y366 437 aa16.01■□□□□ 0.15
HDAC6-231ENST00000488905 A0A0G2JPF8 293 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 SLC35F4A4IF30 521 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 HNRNPCL2B2RXH8 293 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 HNRNPCL3B7ZW38 293 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 HNRNPCL1O60812 293 aaKnown RBP16■□□□□ 0.15
HDAC6-231ENST00000488905 IGKV3-15P01624 115 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 OR4A8P0C604 315 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 HNRNPCL4P0DMR1 293 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 GTF2E2P29084 291 aaKnown RBP16■□□□□ 0.15
HDAC6-231ENST00000488905 CALCRP30988 508 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 WDR4P57081 412 aaKnown RBP16■□□□□ 0.15
HDAC6-231ENST00000488905 ROR2Q01974 943 aaKnown RBP16■□□□□ 0.15
HDAC6-231ENST00000488905 EGR4Q05215 589 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 ATG16L1Q676U5 607 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 IL17RELQ6ZVW7 336 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 FAM169BQ8N8A8 192 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 ITCHQ96J02 903 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 PARD6BQ9BYG5 372 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 BPESC1Q9GZL8 116 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 SDR39U1Q9NRG7 319 aaPredicted RBP16■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF232Q9UNY5 417 aa16■□□□□ 0.15
HDAC6-231ENST00000488905 SLCO1B7G3V0H7 640 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 FZD7O75084 574 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF43P17038 809 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 RPS5P46782 204 aaKnown RBP15.99■□□□□ 0.15
HDAC6-231ENST00000488905 CLDN17P56750 224 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 SLC9B1Q4ZJI4 515 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF311Q5JNZ3 666 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 C6orf10Q5SRN2 563 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 FAM120AOSQ5T036 256 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 MYPOPQ86VE0 399 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-231ENST00000488905 KDM8Q8N371 416 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 ANKK1Q8NFD2 765 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 NUP37Q8NFH4 326 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 OR4F15Q8NGB8 312 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 OR9I1Q8NGQ6 314 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 SLC35B4Q969S0 331 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 SLC25A36Q96CQ1 311 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 FOXN4Q96NZ1 517 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 SEC14L4Q9UDX3 406 aa15.99■□□□□ 0.15
HDAC6-231ENST00000488905 TMEM120BA0PK00 339 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 RPL36A-HNRNPH2H7BZ11 118 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF432O94892 652 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 CELA3BP08861 270 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 HOXB1P14653 301 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF23P17027 643 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 HNF1AP20823 631 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 IDH3GP51553 393 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-231ENST00000488905 HOXC5Q00444 222 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 IQCCQ4KMZ1 466 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 C6orf89Q6UWU4 347 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 MAVSQ7Z434 540 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 CROCCP2Q86T23 111 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 MGARPQ8TDB4 240 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 KTI12Q96EK9 354 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF442Q9H7R0 627 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 A4GALTQ9NPC4 353 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 B3GAT1Q9P2W7 334 aa15.98■□□□□ 0.15
HDAC6-231ENST00000488905 FBXO9Q9UK97 447 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-231ENST00000488905 SLC43A1O75387 559 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 NUDT7P0C024 238 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 POLR2JP52435 117 aaKnown RBP15.97■□□□□ 0.15
HDAC6-231ENST00000488905 ARF1P84077 181 aaKnown RBP15.97■□□□□ 0.15
HDAC6-231ENST00000488905 HGFACQ04756 655 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 RGNQ15493 299 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF540Q8NDQ6 660 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 BBS10Q8TAM1 723 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 MAL2Q969L2 176 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 C19orf24Q9BVV8 132 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 RAB1BQ9H0U4 201 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 C12orf10Q9HB07 376 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 BCL2L10Q9HD36 194 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 RPS6KB2Q9UBS0 482 aa15.97■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF503-AS2A6NEH8 195 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 hCG_2039718K7EN88 272 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 M0R082 166 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 AIM2O14862 343 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 UBDO15205 165 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms