RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 EFCAB9A8MZ26 197 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 FTCDNL1E5RQL4 147 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 H0YHG0 523 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 M0R082 166 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 GPR171O14626 319 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 SMAD9O15198 467 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 PIP5K1CO60331 668 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 CYTIPO60759 359 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 AQP8O94778 261 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 VAMP5O95183 116 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 BGLAPP02818 100 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 TMIGD3P0DMS9 266 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 FUT4P22083 530 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 AHCYP23526 432 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 CTBP2P56545 445 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 H3F3AP84243 136 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 LTBQ06643 244 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 PPP1R8Q12972 351 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 C1DQ13901 141 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 ATP6AP1Q15904 470 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 MICAQ29983 383 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 TMEM201Q5SNT2 666 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 PLXDC2Q6UX71 529 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 TMPRSS11FQ6ZWK6 438 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 OAFQ86UD1 273 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 GPAT4Q86UL3 456 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 CCDC103Q8IW40 242 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 TMEM99Q8N816 258 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 SCAIQ8N9R8 606 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 C9orf106Q8NAJ2 232 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 OR5J2Q8NH18 312 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 MBD3L2Q8NHZ7 208 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 ZNF417Q8TAU3 575 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 GNPDA2Q8TDQ7 276 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 INTS12Q96CB8 462 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 MOGAT1Q96PD6 335 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 ZNF587Q96SQ5 575 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 MDFIQ99750 246 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 TACO1Q9BSH4 297 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 NDEL1Q9GZM8 345 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 RNF122Q9H9V4 155 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 S100A14Q9HCY8 104 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 CHST11Q9NPF2 352 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 C20orf141Q9NUB4 165 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 MRPL39Q9NYK5 338 aaKnown RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 EMC3Q9P0I2 261 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 ERRFI1Q9UJM3 462 aaPredicted RBP9.19□□□□□ -0.94
SKA1-204ENST00000488454 EMC9Q9Y3B6 208 aa9.19□□□□□ -0.94
SKA1-204ENST00000488454 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 LRRN3E7EW58 273 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 BLOC1S5-TXNDC5H3BN57 136 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 PYCARD-AS1I3L0S3 204 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 PLPP3O14495 311 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 BAG2O95816 211 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 CRHP06850 196 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 YES1P07947 543 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 ZNF43P17038 809 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 CTSSP25774 331 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 GRNP28799 593 aaKnown RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 OPRM1P35372 400 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 GPR4P46093 362 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 SLC9A3P48764 834 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 PDK3Q15120 406 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 SEC23BQ15437 767 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 SEM1Q6ZVN7 128 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 NANOGNBQ7Z5D8 188 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 AMIGO2Q86SJ2 522 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 ZDHHC13Q8IUH4 622 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 RPRMLQ8N4K4 120 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 LRRC17Q8N6Y2 441 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 CNEP1R1Q8N9A8 125 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 OR10G2Q8NGC3 310 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 OR4C15Q8NGM1 316 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 RNF128Q8TEB7 428 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 GIPC3Q8TF64 312 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 ABHD3Q8WU67 409 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 LRTOMTQ8WZ04 291 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 SDCCAG3Q96C92 435 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 NRBF2Q96F24 287 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 CENPNQ96H22 339 aaPredicted RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 GMPPAQ96IJ6 420 aaPredicted RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 OXGR1Q96P68 337 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 DMRTA2Q96SC8 542 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 FUZQ9BT04 418 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 SF3B5Q9BWJ5 86 aaKnown RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 ZNF556Q9HAH1 456 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 GP6Q9HCN6 339 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 PDP1Q9P0J1 537 aaPredicted RBP9.18□□□□□ -0.94
SKA1-204ENST00000488454 KLHL13Q9P2N7 655 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 CLEC4AQ9UMR7 237 aa9.18□□□□□ -0.94
SKA1-204ENST00000488454 MED12Q93074 2177 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 SHANK1Q9Y566 2161 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 UNC119BA6NIH7 251 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 ZNF724A8MTY0 619 aa9.17□□□□□ -0.94
SKA1-204ENST00000488454 KDM4EB2RXH2 506 aaPredicted RBP9.17□□□□□ -0.94
SKA1-204ENST00000488454 G3V2T6 193 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms