RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 ZSWIM7Q19AV6 140 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 SLC35D3Q5M8T2 416 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 BTN2A1Q7KYR7 527 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 ZNF595Q8IYB9 648 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 SMIM4Q8WVI0 70 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 RNF166Q96A37 237 aaPredicted RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 RANBP3Q9H6Z4 567 aaPredicted RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 RXFP3Q9NSD7 469 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 CD207Q9UJ71 328 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 KLHDC2Q9Y2U9 406 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 TMEM184BQ9Y519 407 aaPredicted RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 MPDZO75970 2070 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 TMEM72A0PK05 275 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 H3BSH0 61 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 ZNF593O00488 134 aaPredicted RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 GSTZ1O43708 216 aaPredicted RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 SSNA1O43805 119 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 HPXP02790 462 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 OR8G3PP0DMU2 310 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 TMEM255AQ5JRV8 349 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 CBLN3Q6UW01 205 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 MED25Q71SY5 747 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 CMIPQ8IY22 773 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 OR6C4Q8NGE1 309 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 PIGKQ92643 395 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 ZNF524Q96C55 264 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 ADAD1Q96M93 576 aaKnown RBP16.38■□□□□ 0.21
VIM-206ENST00000487938 COPZ2Q9P299 210 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 RCE1Q9Y256 329 aa16.38■□□□□ 0.21
VIM-206ENST00000487938 A0A1B0GTH9 108 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 H7C1C5 153 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 GPR171O14626 319 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 GPRIN2O60269 458 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 CD1AP06126 327 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
VIM-206ENST00000487938 CTXN1P60606 82 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 PRPS1P60891 318 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 LCN6P62502 163 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 RPS4XP62701 263 aaKnown RBP16.37■□□□□ 0.21
VIM-206ENST00000487938 ANGPT1Q15389 498 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 KLHL26Q53HC5 615 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 SLC22A10Q63ZE4 541 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 LUZP2Q86TE4 346 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 JAZF1Q86VZ6 243 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 ZNF321PQ8N8H1 164 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 ZNF615Q8N8J6 731 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 OR52I2Q8NH67 350 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 PHOSPHO1Q8TCT1 267 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 SLC25A38Q96DW6 304 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 GPR137Q96N19 417 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 MFRPQ9BY79 579 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 FKRPQ9H9S5 495 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 LIN7BQ9HAP6 207 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 UCKL1Q9NWZ5 548 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 KLK11Q9UBX7 282 aa16.37■□□□□ 0.21
VIM-206ENST00000487938 CTDSPLO15194 276 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 MAOBP27338 520 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 DPP4P27487 766 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 OR3A3P47888 321 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 SOX2P48431 317 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 IGLV3-21P80748 117 aaPredicted RBP16.36■□□□□ 0.21
VIM-206ENST00000487938 FUT7Q11130 342 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 BAIAP2L2Q6UXY1 529 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 MRPL48Q96GC5 212 aaKnown RBP16.36■□□□□ 0.21
VIM-206ENST00000487938 TOE1Q96GM8 510 aaKnown RBP16.36■□□□□ 0.21
VIM-206ENST00000487938 KLHDC3Q9BQ90 382 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 C20orf85Q9H1P6 137 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 NANSQ9NR45 359 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 TMA7Q9Y2S6 64 aaKnown RBP16.36■□□□□ 0.21
VIM-206ENST00000487938 TVP23AA6NH52 213 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 A8MUA0 341 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 AIPO00170 330 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 TNFRSF10AO00220 468 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 DCTN6O00399 190 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 HPGDP15428 266 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 CCR9P51686 369 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 PER3P56645 1201 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 DYRK1AQ13627 763 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 ZNF684Q5T5D7 378 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 ZNF527Q8NB42 609 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 SPRTNQ9H040 489 aaPredicted RBP16.36■□□□□ 0.21
VIM-206ENST00000487938 HRASLSQ9HDD0 168 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 V9GY05 133 aa16.36■□□□□ 0.21
VIM-206ENST00000487938 PDCD5O14737 125 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 NOS1APO75052 506 aaPredicted RBP16.35■□□□□ 0.21
VIM-206ENST00000487938 CLPSP04118 112 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 UQCRC1P31930 480 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 RPS27P42677 84 aaKnown RBP16.35■□□□□ 0.21
VIM-206ENST00000487938 RPS15P62841 145 aaKnown RBP16.35■□□□□ 0.21
VIM-206ENST00000487938 LTBQ06643 244 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 ZNF74Q16587 644 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 ALG10Q5BKT4 473 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 WBP2NLQ6ICG8 309 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 APOOLQ6UXV4 268 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 ZSCAN1Q8NBB4 408 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 LSM14AQ8ND56 463 aaKnown RBP16.35■□□□□ 0.21
VIM-206ENST00000487938 OR56B4Q8NH76 319 aa16.35■□□□□ 0.21
VIM-206ENST00000487938 SYNPRQ8TBG9 265 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms