RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 KLK3P07288 261 aaPredicted RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 ZDHHC11BP0C7U3 371 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 PRPS2P11908 318 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 POU2F1P14859 743 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 FUT1P19526 365 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 TBXA2RP21731 343 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 YBEYP58557 167 aaPredicted RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 ZNF816Q0VGE8 651 aaPredicted RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 RABEPKQ7Z6M1 372 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 TRIM69Q86WT6 500 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 ZNF573Q86YE8 665 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 ZDHHC21Q8IVQ6 265 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 LGI3Q8N145 548 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 OR4D9Q8NGE8 314 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 CCDC43Q96MW1 224 aaKnown RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 MRPL45Q9BRJ2 306 aaKnown RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 NXF5Q9H1B4 397 aaKnown RBP1.45□□□□□ -2.18
SMC4-219ENST00000487747 TM9SF3Q9HD45 589 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 HOXC10Q9NYD6 342 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 ZNRD1Q9P1U0 126 aa1.45□□□□□ -2.18
SMC4-219ENST00000487747 C12orf71A8MTZ7 269 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 TRDCB7Z8K6 153 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 SGK1O00141 431 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 HIP1O00291 1037 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 BGLAPP02818 100 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 OPN1MWP04001 364 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 OPN1MW2P0DN77 364 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 OPN1MW3P0DN78 364 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 IGHV3-43DP0DP04 118 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 YWHABP31946 246 aaKnown RBP1.44□□□□□ -2.18
SMC4-219ENST00000487747 RAP1AP62834 184 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 CDC20Q12834 499 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 CBX3Q13185 183 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 IRF4Q15306 451 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 NIPAL3Q6P499 406 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 SYT10Q6XYQ8 523 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 NCCRP1Q6ZVX7 275 aaPredicted RBP1.44□□□□□ -2.18
SMC4-219ENST00000487747 KIAA1328Q86T90 577 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 NECAP1Q8NC96 275 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 RNF139Q8WU17 664 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 MYLPFQ96A32 169 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 AURKBQ96GD4 344 aaPredicted RBP1.44□□□□□ -2.18
SMC4-219ENST00000487747 WFIKKN1Q96NZ8 548 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 RUFY1Q96T51 708 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 RIOK2Q9BVS4 552 aaKnown RBP1.44□□□□□ -2.18
SMC4-219ENST00000487747 ACTR6Q9GZN1 396 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 WDR76Q9H967 626 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 AIPL1Q9NZN9 384 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 IL19Q9UHD0 177 aa1.44□□□□□ -2.18
SMC4-219ENST00000487747 SPAG9O60271 1321 aaKnown RBP1.43□□□□□ -2.18
SMC4-219ENST00000487747 LGALS3P17931 250 aaKnown RBP1.43□□□□□ -2.18
SMC4-219ENST00000487747 HLA-DPA1P20036 260 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 HPCAL1P37235 193 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 NAPAP54920 295 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 MXD4Q14582 209 aaPredicted RBP1.43□□□□□ -2.18
SMC4-219ENST00000487747 CES3Q6UWW8 571 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 OR2L13Q8N349 312 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 MIR7-3HGQ8N6C7 128 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 OR1N2Q8NGR9 330 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 SLC13A3Q8WWT9 602 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 SEC22AQ96IW7 307 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 RNF5Q99942 180 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 ACAT2Q9BWD1 397 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 TEKT3Q9BXF9 490 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 CAPS2Q9BXY5 557 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 SEC14L3Q9UDX4 400 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 TBK1Q9UHD2 729 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 GSTK1Q9Y2Q3 226 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 TMEM14AQ9Y6G1 99 aa1.43□□□□□ -2.18
SMC4-219ENST00000487747 WDR62O43379 1518 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 IGKV2-24A0A0C4DH68 120 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ZNF850A8MQ14 1090 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 H0YHG0 523 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 MBD3O95983 291 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 MT-ATP6P00846 226 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ALDOBP05062 364 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 PCMT1P22061 227 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 KIF5BP33176 963 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ADRA1AP35348 466 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ACVR1Q04771 509 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 GAMTQ14353 236 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 TP53I3Q53FA7 332 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 PLBD1Q6P4A8 553 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 LINC00173Q6ZV60 143 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 BIVMQ86UB2 503 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ELMOD2Q8IZ81 293 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ZNF713Q8N859 430 aaPredicted RBP1.42□□□□□ -2.18
SMC4-219ENST00000487747 MSANTD4Q8NCY6 345 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 HTR3CQ8WXA8 447 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ACOT11Q8WXI4 607 aaPredicted RBP1.42□□□□□ -2.18
SMC4-219ENST00000487747 L3HYPDHQ96EM0 354 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 ATXN10Q9UBB4 475 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 SPASTQ9UBP0 616 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 CD84Q9UIB8 345 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 AK6Q9Y3D8 172 aaKnown RBP1.42□□□□□ -2.18
SMC4-219ENST00000487747 ZSWIM8A7E2V4 1837 aa1.42□□□□□ -2.18
SMC4-219ENST00000487747 SCN4AP35499 1836 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 OR4F21O95013 312 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 COX5AP20674 150 aa1.41□□□□□ -2.18
SMC4-219ENST00000487747 GPM6AP51674 278 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms