RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 POU4F3Q15319 338 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 MICAQ29983 383 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 EXOC3L2Q2M3D2 409 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 NCCRP1Q6ZVX7 275 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 LSRQ86X29 649 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 LRRC17Q8N6Y2 441 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 LILRB4Q8NHJ6 448 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 ZNF417Q8TAU3 575 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 NRBF2Q96F24 287 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 OXGR1Q96P68 337 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 ZNF587Q96SQ5 575 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 SFXN3Q9BWM7 321 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 ING1Q9UK53 422 aaPredicted RBP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 RNF6Q9Y252 685 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 EMC9Q9Y3B6 208 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 SAMHD1Q9Y3Z3 626 aaKnown RBP11.86□□□□□ -0.51
COL4A6-207ENST00000487645 ALPK2Q86TB3 2170 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 TENM4Q6N022 2769 aa11.86□□□□□ -0.51
COL4A6-207ENST00000487645 EFCAB9A8MZ26 197 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 DVL2O14641 736 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 RAMP1O60894 148 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 CCNB2O95067 398 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 OR6A2O95222 327 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 LDLRP01130 860 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 MAKP20794 623 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 SRSF1Q07955 248 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PUDPQ08623 228 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 FOXF2Q12947 444 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 ATP6AP1Q15904 470 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 TMEM201Q5SNT2 666 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 C1orf94Q6P1W5 598 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 ZER1Q7Z7L7 766 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 OAFQ86UD1 273 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 CCDC71Q8IV32 467 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-207ENST00000487645 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 GCNT2Q8N0V5 402 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 ZNF808Q8N4W9 903 aaPredicted RBP11.85□□□□□ -0.51
COL4A6-207ENST00000487645 FAM26EQ8N5C1 309 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 GNPDA2Q8TDQ7 276 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PYDC1Q8WXC3 89 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 BDH2Q9BUT1 245 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PIGMQ9H3S5 423 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PLSCR4Q9NRQ2 329 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 PARPBPQ9NWS1 579 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 VNN3Q9NY84 501 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 TAS2R5Q9NYW4 299 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 U3KQV3 271 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 HCFC1P51610 2035 aa11.85□□□□□ -0.51
COL4A6-207ENST00000487645 SPTBN1Q01082 2364 aaKnown RBP11.85□□□□□ -0.51
COL4A6-207ENST00000487645 CACNA1CQ13936 2221 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ARRDC5A6NEK1 342 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 KLF4O43474 513 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 OR10H3O60404 316 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ZG16O60844 167 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ENTPD5O75356 428 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 TNFSF13O75888 250 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 AGFG2O95081 481 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ADORA3P0DMS8 318 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ZNF43P17038 809 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 AGTR1P30556 359 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ARHGDIAP52565 204 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ZBED5Q49AG3 693 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-207ENST00000487645 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 GALNT5Q7Z7M9 940 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 GPAT4Q86UL3 456 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 CNEP1R1Q8N9A8 125 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 OR9K2Q8NGE7 335 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 ITLN2Q8WWU7 325 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-207ENST00000487645 SDCCAG3Q96C92 435 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 STARD4Q96DR4 205 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 NTN4Q9HB63 628 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 SEC14L4Q9UDX3 406 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 CLEC4AQ9UMR7 237 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 HIF3AQ9Y2N7 669 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 NOX1Q9Y5S8 564 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 FLVCR1Q9Y5Y0 555 aa11.84□□□□□ -0.51
COL4A6-207ENST00000487645 BLOC1S5-TXNDC5H3BN57 136 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 CDC42EP2O14613 210 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 PTP4A3O75365 173 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 E2F6O75461 281 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 CGAP01215 116 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 CD8BP10966 210 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 AHCYP23526 432 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 FPR3P25089 353 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 UQCRC1P31930 480 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 GPR4P46093 362 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 GSSP48637 474 aa11.83□□□□□ -0.52
COL4A6-207ENST00000487645 PRPS1P60891 318 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms