RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CAV2P51636 162 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 TAS2R19P59542 299 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 NDPQ00604 133 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 BST1Q10588 318 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 HERPUD1Q15011 391 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 ATP6AP1Q15904 470 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 RNF165Q6ZSG1 346 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 SLC22A9Q8IVM8 553 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 CDH26Q8IXH8 852 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 NKAPP1Q8N9T2 125 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 OR9K2Q8NGE7 335 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 PYROXD1Q8WU10 500 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 TM4SF19Q96DZ7 209 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 TMEM101Q96IK0 257 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 OXGR1Q96P68 337 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 NT5MQ9NPB1 228 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 PLSCR3Q9NRY6 295 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 GIN1Q9NXP7 522 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 SLC2A8Q9NY64 477 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 ZNF256Q9Y2P7 627 aaPredicted RBP3.21□□□□□ -1.9
SMC4-218ENST00000486711 ATP10AO60312 1499 aa3.21□□□□□ -1.9
SMC4-218ENST00000486711 FAM231BA6NCW3 169 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 A8MUA0 341 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 AP3B1O00203 1094 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 WBP4O75554 376 aaKnown RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 IGLV1-47P01700 117 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 MMP1P03956 469 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 ZNF853P0CG23 659 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 TNNI1P19237 187 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 FUT3P21217 361 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 SLC2A5P22732 501 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 CASP14P31944 242 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 VDAC2P45880 294 aaPredicted RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 SUCLG1P53597 346 aaKnown RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 PRPS1P60891 318 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 ERVK-25P63136 954 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 PPP1R7Q15435 360 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 C6orf223Q8N319 242 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 OR6C4Q8NGE1 309 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 OR9G1Q8NH87 305 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 NEIL3Q8TAT5 605 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 FANK1Q8TC84 345 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 SLC2A14Q8TDB8 520 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 FAM151AQ8WW52 585 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 FRAT1Q92837 279 aaPredicted RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 ITCHQ96J02 903 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 PLEKHA8Q96JA3 519 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 ZIM3Q96PE6 472 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 PANX2Q96RD6 677 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 ROGDIQ9GZN7 287 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 C20orf85Q9H1P6 137 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 RNF167Q9H6Y7 350 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 MRPL47Q9HD33 250 aaKnown RBP3.2□□□□□ -1.9
SMC4-218ENST00000486711 NMRK1Q9NWW6 199 aa3.2□□□□□ -1.9
SMC4-218ENST00000486711 PSTPIP1O43586 416 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 ERLIN2O94905 339 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 KLF8O95600 359 aaPredicted RBP3.19□□□□□ -1.9
SMC4-218ENST00000486711 ZNF19P17023 458 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 HTR1EP28566 365 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 FMO3P31513 532 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 CRYBB2P43320 205 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 DLX1P56177 255 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 WNT4P56705 351 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 DGUOKQ16854 277 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 CCDC14Q49A88 953 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 PRSS41Q7RTY9 318 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 ZNF546Q86UE3 836 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 FAM228AQ86W67 206 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 TPRX1Q8N7U7 411 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 CEP112Q8N8E3 955 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 OR1L6Q8NGR2 347 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 CYYR1Q96J86 154 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 KCNA7Q96RP8 456 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 PLEKHF1Q96S99 279 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 RANBP3Q9H6Z4 567 aaPredicted RBP3.19□□□□□ -1.9
SMC4-218ENST00000486711 ASB8Q9H765 288 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 NANOGQ9H9S0 305 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 SIAEQ9HAT2 523 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 GLRX2Q9NS18 164 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 KLHL28Q9NXS3 571 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 SPATA7Q9P0W8 599 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 SLC7A8Q9UHI5 535 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 PRO0461Q9UI25 63 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 MMP17Q9ULZ9 603 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 ARHGAP23Q9P227 1491 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 LRRK1Q38SD2 2015 aa3.19□□□□□ -1.9
SMC4-218ENST00000486711 E9PBE3 544 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 DYNC1I1O14576 645 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 OR7A10O76100 309 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 UQCRFS1P1P0C7P4 283 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 TROVE2P10155 538 aaKnown RBP eCLIP3.18□□□□□ -1.9
SMC4-218ENST00000486711 HPGDP15428 266 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 IFNA8P32881 189 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 FDFT1P37268 417 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 YAP1P46937 504 aaKnown RBP3.18□□□□□ -1.9
SMC4-218ENST00000486711 ZNF763Q0D2J5 394 aa3.18□□□□□ -1.9
SMC4-218ENST00000486711 BST2Q10589 180 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms