RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 ENKD1Q9H0I2 346 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 FKRPQ9H9S5 495 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 MRPL39Q9NYK5 338 aaKnown RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF229Q9UJW7 825 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF835Q9Y2P0 537 aa11.42□□□□□ -0.58
HDAC6-229ENST00000486665 TRAV27A0A087WT01 109 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 CLCA1A8K7I4 914 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 AHRRA9YTQ3 701 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 PLPP3O14495 311 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 EI24O14681 340 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 SMAD9O15198 467 aaKnown RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 TGM6O95932 706 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ADAP00813 363 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 TP53P04637 393 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 HIST1H2ABP04908 130 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 TSPAN19P0C672 248 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 SAGP10523 405 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 AQP2P41181 271 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 FXYD6P3P58550 94 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 PPP2R2BQ00005 443 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 PMS2P3Q13401 168 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 DAG1Q14118 895 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ZBED5Q49AG3 693 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 KDM4DQ6B0I6 523 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 KLHL17Q6TDP4 642 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 CD300LDQ6UXZ3 194 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ZBTB49Q6ZSB9 765 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 H1FNTQ75WM6 255 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 HIST3H2AQ7L7L0 130 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 CHMP1BQ7LBR1 199 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ADGRE4PQ86SQ3 457 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 OAFQ86UD1 273 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 CD163Q86VB7 1156 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 DOLPP1Q86YN1 238 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ST6GALNAC3Q8NDV1 305 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 OR5J2Q8NH18 312 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 MAGEE2Q8TD90 523 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 HIST1H2ACQ93077 130 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 EME1Q96AY2 570 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 NAA11Q9BSU3 229 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 ASPNQ9BXN1 380 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 MCCC2Q9HCC0 563 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 CHST11Q9NPF2 352 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 KRCC1Q9NPI7 259 aaPredicted RBP11.41□□□□□ -0.58
HDAC6-229ENST00000486665 TIGARQ9NQ88 270 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 TAS2R5Q9NYW4 299 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 REV1Q9UBZ9 1251 aa11.41□□□□□ -0.58
HDAC6-229ENST00000486665 AQP7P3A6NL99 342 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 BLOC1S5-TXNDC5H3BN57 136 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 LRRTM2O43300 516 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 DNPH1O43598 174 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 EIF1BO60739 113 aaKnown RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 AQP8O94778 261 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 HPRP00739 348 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 ALPLP05186 524 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 ABOP16442 354 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 SLC9A3P48764 834 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 MFSD13AQ14CX5 517 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 PON3Q15166 354 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 ACSF3Q4G176 576 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 RTL6Q6ICC9 239 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 PPP4R4Q6NUP7 873 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 RPTNQ6XPR3 784 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 Q6ZPB1 254 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 GALNT5Q7Z7M9 940 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 GALNT4Q8N4A0 578 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 SCAIQ8N9R8 606 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 LRRC75AQ8NAA5 344 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 FNDC9Q8TBE3 224 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 CPNE4Q96A23 557 aaPredicted RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 SDCCAG3Q96C92 435 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 TRIB1Q96RU8 372 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 RBM4BQ9BQ04 359 aaKnown RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 RBM4Q9BWF3 364 aaKnown RBP11.4□□□□□ -0.58
HDAC6-229ENST00000486665 EGLN3Q9H6Z9 239 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 ZNF556Q9HAH1 456 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 USE1Q9NZ43 259 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 KIF17Q9P2E2 1029 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 OSGIN2Q9Y236 505 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 SIGLEC7Q9Y286 467 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 B3GALT5Q9Y2C3 310 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 HIF3AQ9Y2N7 669 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 CORINQ9Y5Q5 1042 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 DNAJC13O75165 2243 aa11.4□□□□□ -0.58
HDAC6-229ENST00000486665 DCHS2Q6V1P9 2916 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 SLC19A2O60779 497 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 SYNGR4O95473 234 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ADORA3P0DMS8 318 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 GSTM3P21266 225 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 UQCRC1P31930 480 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 POLR2IP36954 125 aaKnown RBP11.39□□□□□ -0.59
HDAC6-229ENST00000486665 ALDH3A2P51648 485 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 NUP107P57740 925 aa11.39□□□□□ -0.59
HDAC6-229ENST00000486665 RPS4XP62701 263 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms