RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PTH2RP49190 550 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 SELENOPP49908 381 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 P2RY4P51582 365 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CDH12P55289 794 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CLDN17P56750 224 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 RIPPLY3P57055 190 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 GABRA6Q16445 453 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
CHMP3-208ENST00000486404 HMBOX1Q6NT76 420 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 ERICH5Q6P6B1 374 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 ZNF613Q6PF04 617 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 SLC22A25Q6T423 547 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CREB3L2Q70SY1 520 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 YTHDF3Q7Z739 585 aaKnown RBP11.33□□□□□ -0.6
CHMP3-208ENST00000486404 DEPDC4Q8N2C3 294 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 ZIC4Q8N9L1 334 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 TAMM41Q96BW9 452 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 NPAP1Q9NZP6 1156 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 ARMCX1Q9P291 453 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 SEC14L4Q9UDX3 406 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 MGAT4BQ9UQ53 548 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 LAMP3Q9UQV4 416 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 RCE1Q9Y256 329 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 B3GALT5Q9Y2C3 310 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 CORINQ9Y5Q5 1042 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 SLC25A15Q9Y619 301 aa11.33□□□□□ -0.6
CHMP3-208ENST00000486404 LOC100653049A0A140TA62 436 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 DPRXA6NFQ7 191 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 PDLIM1O00151 329 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 CHP2O43745 196 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 SLC43A1O75387 559 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 KRT34O76011 436 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 LGI1O95970 557 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 IFNA14P01570 189 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 PTAFRP25105 342 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 FOXG1P55316 489 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-208ENST00000486404 SH3BGRP55822 239 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-208ENST00000486404 ATP5J2P56134 94 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 NRF1Q16656 503 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 DUSP7Q16829 419 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 ENTPD8Q5MY95 495 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 H1FNTQ75WM6 255 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-208ENST00000486404 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 EPHX4Q8IUS5 362 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 UEVLDQ8IX04 471 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 KDM8Q8N371 416 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 SCAIQ8N9R8 606 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 ADPRHL1Q8NDY3 354 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 GPR32P1Q8NGA4 272 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 OR6T1Q8NGN1 323 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-208ENST00000486404 C10orf82Q8WW14 230 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 NEUROG1Q92886 237 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 RCN3Q96D15 328 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 OXGR1Q96P68 337 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 TMEM43Q9BTV4 400 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 RSPO3Q9BXY4 272 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-208ENST00000486404 GSX2Q9BZM3 304 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 AMBRA1Q9C0C7 1298 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 SLC17A5Q9NRA2 495 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
CHMP3-208ENST00000486404 ACANP16112 2415 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 PLCE1Q9P212 2302 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 MTORP42345 2549 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 FAM220BPB1ANY3 271 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 KPNA4O00629 521 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 CCDC22O60826 627 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 SERPINI2O75830 405 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 FOSL1P15407 271 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 PRPS1P60891 318 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 UBE2NP61088 152 aaKnown RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 POU3F1Q03052 451 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 LGALS3BPQ08380 585 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 SPOCK1Q08629 439 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 PMS2P3Q13401 168 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 NPTX1Q15818 432 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 HIKESHIQ53FT3 197 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 DEF8Q6ZN54 512 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 POU5F2Q8N7G0 328 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 OR2T12Q8NG77 320 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 OR6S1Q8NH40 331 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 ADAMTS16Q8TE57 1224 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 Q96MF0 132 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 MUS81Q96NY9 551 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 KCNS3Q9BQ31 491 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 WFDC6Q9BQY6 131 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 NSRP1Q9H0G5 558 aaKnown RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 OBP2BQ9NPH6 170 aa11.31□□□□□ -0.6
CHMP3-208ENST00000486404 CISD1Q9NZ45 108 aaKnown RBP11.31□□□□□ -0.6
CHMP3-208ENST00000486404 USF3Q68DE3 2245 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
CHMP3-208ENST00000486404 TPST2O60704 377 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms