RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 TFF2Q03403 129 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 MALLQ13021 153 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RAB11FIP2Q7L804 512 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 ARSGQ96EG1 525 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 CNRIP1Q96F85 164 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 LCORQ96JN0 433 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SDF2Q99470 211 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RHNO1Q9BSD3 238 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 CST11Q9H112 138 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PCED1AQ9H1Q7 454 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PARP14Q460N5 1801 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 NARSO43776 548 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SLC16A7O60669 478 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PCMT1P22061 227 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TACR3P29371 465 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 DLX5P56178 289 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RAB2AP61019 212 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TGFBR3Q03167 851 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 ACSM3Q53FZ2 586 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 CD276Q5ZPR3 534 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 FBXO42Q6P3S6 717 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PMM1Q92871 262 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TCEAL2Q9H3H9 227 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TRPM6Q9BX84 2022 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 A6NLC8 198 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 PHYHO14832 338 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF749O43361 778 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 GALR3O60755 368 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 IL9P15248 144 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 NAT1P18440 290 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 MRPL19P49406 292 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SNRPGP62308 76 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 FAHD1Q6P587 224 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF836Q6ZNA1 936 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 CFAP77Q6ZQR2 320 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 BEST4Q8NFU0 473 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ADAMTS14Q8WXS8 1223 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 MAP6Q96JE9 813 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 PRRX2Q99811 253 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SRRQ9GZT4 340 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 METTL17Q9H7H0 456 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 DUSP22Q9NRW4 184 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SEMA4GQ9NTN9 838 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 A0A087WUU8 490 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 A0A0G2JMP0 313 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 OTOL1A6NHN0 477 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ARPC1BO15143 372 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 IGFBP1P08833 259 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 CRABP1P29762 137 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 AQP2P41181 271 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 CSNK2A1P68400 391 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 MSRB3Q8IXL7 192 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 LRRC56Q8IYG6 542 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 OR4M2Q8NGB6 313 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 OR13C3Q8NGS6 347 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 GIMAP1Q8WWP7 306 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF582Q96NG8 517 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SLC46A1Q96NT5 459 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF416Q9BWM5 594 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 RBM24Q9BX46 236 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 FN3KQ9H479 309 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 PLEKHA6Q9Y2H5 1048 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 A0A1B0GX78 115 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 F5H5P2 479 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SPDEFO95238 335 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 UTS2O95399 124 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 CHRM4P08173 479 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 TRHRP34981 398 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 HSD17B7P56937 341 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 MRPS10P82664 201 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 DBPQ10586 325 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 RUNX2Q13950 521 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 CRMP1Q14194 572 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 NKG7Q16617 165 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 TCTN3Q6NUS6 607 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 C8orf82Q6P1X6 216 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 TPRA1Q86W33 373 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 GRAMD2AQ8IUY3 354 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 ESX1Q8N693 406 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 PCNPQ8WW12 178 aaKnown RBP10.17□□□□□ -0.78
HDAC6-228ENST00000486227 INTS14Q96SY0 518 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 MFFQ9GZY8 342 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 NTNG1Q9Y2I2 539 aa10.17□□□□□ -0.78
HDAC6-228ENST00000486227 KCNE1BA0A087WTH5 132 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PIP5K1CO60331 668 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PEX14O75381 377 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PRSS23O95084 383 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LALBAP00709 142 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ERCC1P07992 297 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 GLO1Q04760 184 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 HBMQ6B0K9 141 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF322Q6U7Q0 402 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TEX19Q8NA77 164 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 OR2A14Q96R47 310 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 DCLRE1CQ96SD1 692 aaKnown RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 EVA1AQ9H8M9 152 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 CDH20Q9HBT6 801 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PRDM9Q9NQV7 894 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms