RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 OR7E24Q6IFN5 339 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 ZNF613Q6PF04 617 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 SSX8Q7RTT4 187 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 TSPYL5Q86VY4 417 aaPredicted RBP17.17■□□□□ 0.34
SNX5-213ENST00000486039 POU5F2Q8N7G0 328 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 WDR31Q8NA23 367 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 POMGNT2Q8NAT1 580 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 KBTBD8Q8NFY9 601 aa17.17■□□□□ 0.34
SNX5-213ENST00000486039 VANGL1Q8TAA9 524 aaPredicted RBP17.17■□□□□ 0.34
SNX5-213ENST00000486039 AIM2O14862 343 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 ARHGEF9O43307 516 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 BGLAPP02818 100 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 ZNF672Q499Z4 452 aaPredicted RBP17.16■□□□□ 0.34
SNX5-213ENST00000486039 ENTPD8Q5MY95 495 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 SWT1Q5T5J6 900 aaKnown RBP17.16■□□□□ 0.34
SNX5-213ENST00000486039 NIPAL3Q6P499 406 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 LINC00114Q6XXX2 140 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 H1FNTQ75WM6 255 aaPredicted RBP17.16■□□□□ 0.34
SNX5-213ENST00000486039 PCYOX1LQ8NBM8 494 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 OR6S1Q8NH40 331 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 SLC26A7Q8TE54 656 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 RCN3Q96D15 328 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 OXGR1Q96P68 337 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 GID8Q9NWU2 228 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 B3GALT5Q9Y2C3 310 aa17.16■□□□□ 0.34
SNX5-213ENST00000486039 CPSF4LA6NMK7 179 aaKnown RBP17.15■□□□□ 0.34
SNX5-213ENST00000486039 LRRN3E7EW58 273 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 MS4A18H0YCH9 400 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 UPK3AO75631 287 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 ZNF432O94892 652 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 LYPD3O95274 346 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 ZNF43P17038 809 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 CLDN17P56750 224 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 SLC25A3Q00325 362 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 VEZF1Q14119 521 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 MS4A18Q3C1V0 323 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 WDR88Q6ZMY6 472 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 LINGO2Q7L985 606 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 C1orf162Q8NEQ5 155 aaPredicted RBP17.15■□□□□ 0.34
SNX5-213ENST00000486039 RP9Q8TA86 221 aaKnown RBP17.15■□□□□ 0.34
SNX5-213ENST00000486039 ADAMTS16Q8TE57 1224 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 SLC41A3Q96GZ6 507 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 MOGAT1Q96PD6 335 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 EPYCQ99645 322 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 SMR3AQ99954 134 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 TMEM43Q9BTV4 400 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 SLC17A5Q9NRA2 495 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 ROS1P08922 2347 aa17.15■□□□□ 0.34
SNX5-213ENST00000486039 SHISA9B4DS77 424 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 ABCD4O14678 606 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 CHP2O43745 196 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 HPRP00739 348 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 INHBBP09529 407 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 DANCRP0C864 163 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 ZNF83P51522 516 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 TGFBR3Q03167 851 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 Q5PR19 223 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 ERICH5Q6P6B1 374 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 C17orf78Q8N4C9 275 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 ADPRHL1Q8NDY3 354 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 TMEM171Q8WVE6 324 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 RASSF5Q8WWW0 418 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 FBXW5Q969U6 566 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 PERPQ96FX8 193 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 ALKBH3Q96Q83 286 aaPredicted RBP17.14■□□□□ 0.33
SNX5-213ENST00000486039 C1QTNF6Q9BXI9 259 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 GSX2Q9BZM3 304 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 PCDHAC1Q9H158 963 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 LAMP3Q9UQV4 416 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 CORINQ9Y5Q5 1042 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 DSCAMO60469 2012 aa17.14■□□□□ 0.33
SNX5-213ENST00000486039 LOC102725191A0A1B0GVB3 256 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 FAM220BPB1ANY3 271 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 KRT33AO76009 404 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 SOD3P08294 240 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 COX4I1P13073 169 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 CDH2P19022 906 aaPredicted RBP17.13■□□□□ 0.33
SNX5-213ENST00000486039 PTH2RP49190 550 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 SEC24CP53992 1094 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 MFSD13AQ14CX5 517 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 TREML1Q86YW5 311 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 BOD1Q96IK1 185 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 LINC00470Q9BZP3 86 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 CMTM6Q9NX76 183 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 GMPR2Q9P2T1 348 aaKnown RBP17.13■□□□□ 0.33
SNX5-213ENST00000486039 RCE1Q9Y256 329 aa17.13■□□□□ 0.33
SNX5-213ENST00000486039 TRAPPC13A5PLN9 417 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 OR6C65A6NJZ3 312 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 ZNF587BE7ETH6 402 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 TRAF3IP2O43734 574 aaPredicted RBP17.12■□□□□ 0.33
SNX5-213ENST00000486039 CCDC22O60826 627 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 HLA-DOBP13765 273 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 PAX1P15863 534 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 TNFRSF1BP20333 461 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 PTAFRP25105 342 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 CD40P25942 277 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 SPOCK1Q08629 439 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 C1DQ13901 141 aaKnown RBP17.12■□□□□ 0.33
SNX5-213ENST00000486039 PGGHGQ32M88 737 aa17.12■□□□□ 0.33
SNX5-213ENST00000486039 HIKESHIQ53FT3 197 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms