RNA–Protein interactions for RNA: ENST00000485526.1

VWDE-204, Transcript of von Willebrand factor D and EGF domains, human

TSL 2

Gene VWDE, Length 573 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VWDE-204	ENST00000485526	RPL36	Q9Y3U8	105 aa	Known RBP	1	□□□□□ -2.25
VWDE-204	ENST00000485526	BRWD3	Q6RI45	1802 aa		1	□□□□□ -2.25
VWDE-204	ENST00000485526	FBN1	P35555	2871 aa	Known RBP	1	□□□□□ -2.25
VWDE-204	ENST00000485526	NFASC	O94856	1347 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	SHANK1	Q9Y566	2161 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	IGHV5-51	A0A0C4DH38	117 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	IGHV3-66	A0A0C4DH42	116 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NPIPA7	E9PJI5	369 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	LOC110117498-PIK3R3	F6TDL0	507 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	INS-IGF2	F8WCM5	200 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	LANCL1	O43813	399 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	SRP72	O76094	671 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MPZL1	O95297	269 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	BGLAP	P02818	100 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OPN1MW	P04001	364 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZDHHC11B	P0C7U3	371 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	POLR2M	P0CAP2	368 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	UBTFL1	P0CB47	393 aa	Predicted RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NPIPA8	P0DM63	369 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OPN1MW2	P0DN77	364 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OPN1MW3	P0DN78	364 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZNF30	P17039	623 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OMG	P23515	440 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	DNAJB1	P25685	340 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	TDO2	P48775	406 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RPS14	P62263	151 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	SLC25A52	Q3SY17	297 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZBED5	Q49AG3	693 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	TP53I3	Q53FA7	332 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OR2G6	Q5TZ20	316 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	TPGS2	Q68CL5	300 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NCR3LG1	Q68D85	454 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OR52E8	Q6IFG1	317 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	LCN12	Q6JVE5	192 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	AFTPH	Q6ULP2	937 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	CES3	Q6UWW8	571 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	FAM92B	Q6ZTR7	304 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MOB3B	Q86TA1	216 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZNF546	Q86UE3	836 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	CLEC4F	Q8N1N0	589 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	OR2L13	Q8N349	312 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZNF713	Q8N859	430 aa	Predicted RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MRPL43	Q8N983	215 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MGARP	Q8TDB4	240 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RGP1	Q92546	391 aa	Predicted RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	PDXP	Q96GD0	296 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RIT2	Q99578	217 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MRPL45	Q9BRJ2	306 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NIPSNAP3B	Q9BS92	247 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RIOK2	Q9BVS4	552 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	MRPL13	Q9BYD1	178 aa	Known RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RBKS	Q9H477	322 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	POPDC2	Q9HBU9	364 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	SLC17A5	Q9NRA2	495 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	CTPS2	Q9NRF8	586 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	ZNF355P	Q9NSJ1	428 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NPIPA1	Q9UND3	350 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	RASD1	Q9Y272	281 aa		0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	COL27A1	Q8IZC6	1860 aa	Predicted RBP	0.99	□□□□□ -2.25
VWDE-204	ENST00000485526	NCAPD2	Q15021	1401 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	MN1	Q10571	1320 aa	Predicted RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	IGLV3-12	A0A075B6K2	115 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526		H3BNH8	94 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	XKRY	O14609	159 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CHAD	O15335	359 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	RBFOX2	O43251	390 aa	Known RBP eCLIP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	SCGB2A1	O75556	95 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CSF3	P09919	207 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	GKN3P	P0CG01	181 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	ARF4	P18085	180 aa	Predicted RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CD34	P28906	385 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	RABIF	P47224	123 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	FGF8	P55075	233 aa	Predicted RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	STARD6	P59095	220 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	RAP1A	P62834	184 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	ACVR1	Q04771	509 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	KCNIP4	Q6PIL6	250 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	H2AFV	Q71UI9	128 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	PGAP1	Q75T13	922 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CCDC65	Q8IXS2	484 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	LRRC43	Q8N309	656 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	C15orf56	Q8N910	161 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CATSPER1	Q8NEC5	780 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	ACOT11	Q8WXI4	607 aa	Predicted RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	ESR2	Q92731	530 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	SH3YL1	Q96HL8	342 aa	Predicted RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	FAM111A	Q96PZ2	611 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	KCNK16	Q96T55	309 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	FOXC2	Q99958	501 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	ZNF416	Q9BWM5	594 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	TMEM117	Q9H0C3	514 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	DPH5	Q9H2P9	285 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	RPP21	Q9H633	154 aa	Known RBP	0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	HOXC10	Q9NYD6	342 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	CD84	Q9UIB8	345 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	TUBGCP6	Q96RT7	1819 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526	PCNX2	A6NKB5	2137 aa		0.98	□□□□□ -2.25
VWDE-204	ENST00000485526		A0A1B0GVX0	72 aa		0.97	□□□□□ -2.25
VWDE-204	ENST00000485526	TRIM64	A6NGJ6	449 aa		0.97	□□□□□ -2.25
VWDE-204	ENST00000485526	TRIM64B	A6NI03	449 aa		0.97	□□□□□ -2.25

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms