RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 FAM169BQ8N8A8 192 aa17.35■□□□□ 0.37
HPS4-213ENST00000483631 KTI12Q96EK9 354 aaPredicted RBP17.35■□□□□ 0.37
HPS4-213ENST00000483631 OXGR1Q96P68 337 aa17.35■□□□□ 0.37
HPS4-213ENST00000483631 RHNO1Q9BSD3 238 aa17.35■□□□□ 0.37
HPS4-213ENST00000483631 A0A1B0GWA3 101 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 HMGB1P1B2RPK0 211 aaPredicted RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 TLX2O43763 284 aaPredicted RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 ZNF432O94892 652 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 RPS5P46782 204 aaKnown RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 NUDT6P53370 316 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 HOXC5Q00444 222 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 SCARB2Q14108 478 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 RAB35Q15286 201 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 TBRG1Q3YBR2 411 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 AGKQ53H12 422 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 ALG10BQ5I7T1 473 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 NIPAL3Q6P499 406 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 HIPK4Q8NE63 616 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 OR10H5Q8NGA6 315 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 TSPEARQ8WU66 669 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 SLC47A1Q96FL8 570 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 C1QTNF6Q9BXI9 259 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 RSPO3Q9BXY4 272 aaPredicted RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 INTS9Q9NV88 658 aaKnown RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 B3GAT1Q9P2W7 334 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 CRNNQ9UBG3 495 aaPredicted RBP17.34■□□□□ 0.37
HPS4-213ENST00000483631 CORINQ9Y5Q5 1042 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 ATP23Q9Y6H3 246 aa17.34■□□□□ 0.37
HPS4-213ENST00000483631 TRAV36DV7A0A075B6V5 113 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 AKAP8O43823 692 aaKnown RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 TP53P04637 393 aaPredicted RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 CSF3P09919 207 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 HTR2AP28223 471 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 UBE2NP61088 152 aaKnown RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 NCALDP61601 193 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 RBBP4Q09028 425 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 ADRM1Q16186 407 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 HIKESHIQ53FT3 197 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 SWT1Q5T5J6 900 aaKnown RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 HMBOX1Q6NT76 420 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 ANKRD16Q6P6B7 361 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 CLEC2AQ6UVW9 174 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 DLEU7Q6UYE1 221 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 H1FNTQ75WM6 255 aaPredicted RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 C10orf111Q8N326 155 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 DPP10Q8N608 796 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 BCL2L2Q92843 193 aaPredicted RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 SLC25A36Q96CQ1 311 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 MAGEB18Q96M61 343 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 ALKBH3Q96Q83 286 aaPredicted RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 SLC38A2Q96QD8 506 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 EPYCQ99645 322 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 SIKE1Q9BRV8 207 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 KATNB1Q9BVA0 655 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 VIPAS39Q9H9C1 493 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 TMEM27Q9HBJ8 222 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 SELENONQ9NZV5 590 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 PMF1-BGLAPU3KQ54 211 aa17.33■□□□□ 0.36
HPS4-213ENST00000483631 YLPM1P49750 1951 aaKnown RBP17.33■□□□□ 0.36
HPS4-213ENST00000483631 IGKV1D-42A0A075B6H8 117 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 A0A087WUJ7 227 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 CD5LO43866 347 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 SSX4O60224 188 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 SLC43A1O75387 559 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 CRLF1O75462 422 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 UPK3AO75631 287 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 LGI1O95970 557 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 CDH2P19022 906 aaPredicted RBP17.32■□□□□ 0.36
HPS4-213ENST00000483631 RUNDC3AQ59EK9 446 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 LSRQ86X29 649 aaPredicted RBP17.32■□□□□ 0.36
HPS4-213ENST00000483631 CCDC36Q8IYA8 594 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 SCAIQ8N9R8 606 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 CKAP2Q8WWK9 683 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 TAAR8Q969N4 342 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 SLC41A3Q96GZ6 507 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 CPPED1Q9BRF8 314 aaPredicted RBP17.32■□□□□ 0.36
HPS4-213ENST00000483631 IKZF5Q9H5V7 419 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.32■□□□□ 0.36
HPS4-213ENST00000483631 SLC13A4Q9UKG4 626 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 TRIM33Q9UPN9 1127 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 ANGPT4Q9Y264 503 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 DNHD1Q96M86 4753 aa17.32■□□□□ 0.36
HPS4-213ENST00000483631 A0A0B4J2E0 115 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 A0A1B0GX12 115 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 ATP6V1G2-DDX39BF2Z307 99 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 M0R082 166 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 TPST1O60507 370 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 FMO6PO60774 539 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 PDE5AO76074 875 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 SLC25A16P16260 332 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 CLDN17P56750 224 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 RGS8P57771 180 aaPredicted RBP17.31■□□□□ 0.36
HPS4-213ENST00000483631 LINGO2Q7L985 606 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 HDXQ7Z353 690 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 COMTD1Q86VU5 262 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 RANBP3LQ86VV4 465 aaPredicted RBP17.31■□□□□ 0.36
HPS4-213ENST00000483631 PRIMA1Q86XR5 153 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 ARMC8Q8IUR7 673 aa17.31■□□□□ 0.36
HPS4-213ENST00000483631 C11orf65Q8NCR3 313 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms