RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 UBLCP1Q8WVY7 318 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 CKAP2Q8WWK9 683 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 NEURL3Q96EH8 262 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 PPP1R36Q96LQ0 422 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ANKRD27Q96NW4 1050 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF317Q96PQ6 595 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 TRNT1Q96Q11 434 aaKnown RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 RHOXF2Q9BQY4 288 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 TAPBPLQ9BX59 468 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 DPY30Q9C005 99 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SLC38A1Q9H2H9 487 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 NELFAQ9H3P2 528 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 TPK1Q9H3S4 243 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 NARFLQ9H6Q4 476 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 MTHFD2LQ9H903 347 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 LPAR2Q9HBW0 351 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 HIF1ANQ9NWT6 349 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 NOP53Q9NZM5 478 aaKnown RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 SLC17A7Q9P2U7 560 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 MARCOQ9UEW3 520 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-206ENST00000483030 ARFGEF3Q5TH69 2177 aa6.38□□□□□ -1.39
CSDE1-206ENST00000483030 HEATR1Q9H583 2144 aaKnown RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 IGHV2OR16-5A0A0B4J2B6 119 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TMEM89A2RUT3 159 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TRIM64CA6NLI5 447 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 SPAG7O75391 227 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 VAMP5O95183 116 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 IGKV3-15P01624 115 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 CHRM4P08173 479 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 GKN3PP0CG01 181 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 NAT2P11245 290 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 UQCRBP14927 111 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TCN1P20061 433 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 COL8A2P25067 703 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 COMPP49747 757 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 NPRL3Q12980 569 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 MAD2L1Q13257 205 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 DAG1Q14118 895 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 GNA13Q14344 377 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 CASP8Q14790 479 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 MRPL2Q5T653 305 aaKnown RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 PRAMEF8Q5VWM4 474 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 PRAMEF7Q5VXH5 474 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 KRT80Q6KB66 452 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 SHQ1Q6PI26 577 aaKnown RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 DEF8Q6ZN54 512 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 LRRC74BQ6ZQY2 392 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 PEG10Q86TG7 708 aaKnown RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 RNF130Q86XS8 419 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 CADM2Q8N3J6 435 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 ANKK1Q8NFD2 765 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 C17orf50Q8WW18 174 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TMEM186Q96B77 213 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 ZMYND19Q96E35 227 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 APOPT1Q96IL0 206 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 LRRC37BQ96QE4 947 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 SLC35A5Q9BS91 424 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 LINC00470Q9BZP3 86 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 AKTIPQ9H8T0 292 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 PPCSQ9HAB8 311 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 CRLF2Q9HC73 371 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 MOV10Q9HCE1 1003 aaKnown RBP6.37□□□□□ -1.39
CSDE1-206ENST00000483030 RLIMQ9NVW2 624 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 ASIC5Q9NY37 505 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TREM2Q9NZC2 230 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 PCDHB10Q9UN67 800 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 RASD1Q9Y272 281 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 CMAHPQ9Y471 501 aa6.37□□□□□ -1.39
CSDE1-206ENST00000483030 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF503-AS2A6NEH8 195 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 CCDC154A6NI56 674 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 A8MVM7 634 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 FAM157AC9JC47 383 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 TRIM77I1YAP6 450 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 WNT9BO14905 357 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ZNF432O94892 652 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 HPXP02790 462 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 DBIP07108 87 aaKnown RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MSMBP08118 114 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 TFPTP0C1Z6 253 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 NR2F1P10589 423 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ATF4P18848 351 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 NR4A1P22736 598 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 S100A3P33764 101 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ARR3P36575 388 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ACAA2P42765 397 aaKnown RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 GPR6P46095 362 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 CAPZA2P47755 286 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SH3BGRP55822 239 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 CLDN17P56750 224 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 COPZ1P61923 177 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SCGB2A2Q13296 93 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SNTB2Q13425 540 aaKnown RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 PDCD2Q16342 344 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ZSCAN26Q16670 478 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 MSMPQ1L6U9 139 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SMU1Q2TAY7 513 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 SPANXN4Q5MJ08 99 aa6.36□□□□□ -1.39
CSDE1-206ENST00000483030 ELFN2Q5R3F8 820 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms