RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 ARL8BQ9NVJ2 186 aa18.35■□□□□ 0.53
NELFE-208ENST00000481121 FAM53CQ9NYF3 392 aa18.35■□□□□ 0.53
NELFE-208ENST00000481121 EDARQ9UNE0 448 aa18.35■□□□□ 0.53
NELFE-208ENST00000481121 CIB4A0PJX0 185 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 KPNA4O00629 521 aaPredicted RBP18.34■□□□□ 0.53
NELFE-208ENST00000481121 RAD51DO75771 328 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 MT-ATP6P00846 226 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 EPHX4Q8IUS5 362 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 OXGR1Q96P68 337 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 ZNF426Q9BUY5 554 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 LIME1Q9H400 295 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 B3GAT1Q9P2W7 334 aa18.34■□□□□ 0.53
NELFE-208ENST00000481121 A0A1W2PPR1 153 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 LRRN3E7EW58 273 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 OR5F1O95221 314 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 SELENOPP49908 381 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 NR1H2P55055 460 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 LTBQ06643 244 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 C1DQ13901 141 aaKnown RBP18.33■□□□□ 0.53
NELFE-208ENST00000481121 NIPAL3Q6P499 406 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 PAMR1Q6UXH9 720 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 VTCN1Q7Z7D3 282 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 PGAM4Q8N0Y7 254 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 POMGNT2Q8NAT1 580 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 CCDC197Q8NCU1 140 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 HS3ST6Q96QI5 342 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 PRSS27Q9BQR3 290 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 SLC19A3Q9BZV2 496 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 PLEKHF2Q9H8W4 249 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 NGBQ9NPG2 151 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 MRPL39Q9NYK5 338 aaKnown RBP18.33■□□□□ 0.53
NELFE-208ENST00000481121 ST6GALNAC2Q9UJ37 374 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 ITGB1BP2Q9UKP3 347 aa18.33■□□□□ 0.53
NELFE-208ENST00000481121 KLF4O43474 513 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 KRT33AO76009 404 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 SERPINA1P01009 418 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 ITGA5P08648 1049 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 NCK1P16333 377 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 CLDN17P56750 224 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 MXRA7P84157 204 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 PMS2P3Q13401 168 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 PIN1Q13526 163 aaPredicted RBP18.33■□□□□ 0.52
NELFE-208ENST00000481121 TIMM23BQ5SRD1 257 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 CBLL1Q75N03 491 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 ABHD12BQ7Z5M8 362 aaPredicted RBP18.33■□□□□ 0.52
NELFE-208ENST00000481121 UEVLDQ8IX04 471 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 RNF148Q8N7C7 305 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 GEMIN6Q8WXD5 167 aaKnown RBP18.33■□□□□ 0.52
NELFE-208ENST00000481121 NINJ1Q92982 152 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 PLPPR2Q96GM1 343 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 PRRC1Q96M27 445 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 ALKBH3Q96Q83 286 aaPredicted RBP18.33■□□□□ 0.52
NELFE-208ENST00000481121 NDE1Q9NXR1 346 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 EGFL7Q9UHF1 273 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 RIMS3Q9UJD0 308 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 RCE1Q9Y256 329 aa18.33■□□□□ 0.52
NELFE-208ENST00000481121 OR6C65A6NJZ3 312 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 OR5H1A6NKK0 313 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 PDLIM1O00151 329 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 AKAP8O43823 692 aaKnown RBP18.32■□□□□ 0.52
NELFE-208ENST00000481121 IFNW1P05000 195 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 FOXG1P55316 489 aaPredicted RBP18.32■□□□□ 0.52
NELFE-208ENST00000481121 PUDPQ08623 228 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 PPA1Q15181 289 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 ZNF74Q16587 644 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 IFI44LQ53G44 452 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 C9orf135Q5VTT2 229 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 P2RY8Q86VZ1 359 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 FITM2Q8N6M3 262 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 OR5J2Q8NH18 312 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 MUCL1Q96DR8 90 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 HSH2DQ96JZ2 352 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 PLEKHA6Q9Y2H5 1048 aa18.32■□□□□ 0.52
NELFE-208ENST00000481121 LOC102725191A0A1B0GVB3 256 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 ENO4A6NNW6 628 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 TRAF3IP2O43734 574 aaPredicted RBP18.31■□□□□ 0.52
NELFE-208ENST00000481121 GMNNO75496 209 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 CH25HO95992 272 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 THRBP10828 461 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 LOXP28300 417 aaPredicted RBP18.31■□□□□ 0.52
NELFE-208ENST00000481121 IFNA8P32881 189 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 RBM34P42696 430 aaKnown RBP18.31■□□□□ 0.52
NELFE-208ENST00000481121 SLC25A3Q00325 362 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 POU3F1Q03052 451 aaPredicted RBP18.31■□□□□ 0.52
NELFE-208ENST00000481121 TGFBR3Q03167 851 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 OR7E24Q6IFN5 339 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 C16orf89Q6UX73 402 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 FKBP9P1Q75LS8 142 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 SSX8Q7RTT4 187 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 NKAIN4Q8IVV8 208 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 FKRPQ9H9S5 495 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 NANSQ9NR45 359 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 ADAM21Q9UKJ8 722 aa18.31■□□□□ 0.52
NELFE-208ENST00000481121 MAP1AP78559 2803 aaPredicted RBP18.31■□□□□ 0.52
NELFE-208ENST00000481121 MS4A18H0YCH9 400 aa18.3■□□□□ 0.52
NELFE-208ENST00000481121 HPRP00739 348 aa18.3■□□□□ 0.52
NELFE-208ENST00000481121 RAF1P04049 648 aa18.3■□□□□ 0.52
NELFE-208ENST00000481121 UMPSP11172 480 aa18.3■□□□□ 0.52
NELFE-208ENST00000481121 DNASE1P24855 282 aa18.3■□□□□ 0.52
NELFE-208ENST00000481121 MPGP29372 298 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms