RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
SIK3-210ENST00000480468 ZNF281Q9Y2X9 895 aa9.78□□□□□ -0.84
SIK3-210ENST00000480468 COL4A3Q01955 1670 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 TRBV23-1A0A0A0MS06 115 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 OR2AT4A6NND4 320 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 H7C4K7 107 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 FADS1O60427 444 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 PPP1R3DO95685 299 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 CD74P04233 296 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 TPT1P13693 172 aaKnown RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 SELLP14151 372 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 HMGA1P17096 107 aaKnown RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 MAKP20794 623 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 NFYBP25208 207 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 ITPKBP27987 946 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 NDUFS1P28331 727 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 HSD17B2P37059 387 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 PRKAG1P54619 331 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 CLDN12P56749 244 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 CRMP1Q14194 572 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 PNLIPRP3Q17RR3 467 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 ACER2Q5QJU3 275 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 STPG1Q5TH74 334 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 LIPNQ5VXI9 398 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 HSD11B1LQ7Z5J1 315 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 RFLNBQ8N5W9 214 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 SDR9C7Q8NEX9 313 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 OR5AP2Q8NGF4 316 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 OR4C6Q8NH72 309 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 WNT2BQ93097 391 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 ZG16BQ96DA0 208 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 PIK3IP1Q96FE7 263 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 CNN2Q99439 309 aaKnown RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 PDCD1LG2Q9BQ51 273 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 CHST6Q9GZX3 395 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 SLITRK2Q9H156 845 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 STARD7Q9NQZ5 370 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 SDHAF3Q9NRP4 125 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 NCDNQ9UBB6 729 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 ZNF230Q9UIE0 474 aaPredicted RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 MAFFQ9ULX9 164 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 KCNE3Q9Y6H6 103 aa9.77□□□□□ -0.85
SIK3-210ENST00000480468 MDC1Q14676 2089 aaKnown RBP9.77□□□□□ -0.85
SIK3-210ENST00000480468 NDUFS4O43181 175 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 POP4O95707 220 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 IFNGP01579 166 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 GTF2F2P13984 249 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 CBR1P16152 277 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 THPOP40225 353 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 RBM34P42696 430 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 ZNF124Q15973 351 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 NKPD1Q17RQ9 610 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 ALG11Q2TAA5 492 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 OR2B11Q5JQS5 317 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 C22orf39Q6P5X5 142 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 ANKRD16Q6P6B7 361 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 Q6ZNB5 142 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 STX12Q86Y82 276 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 KDF1Q8NAX2 398 aaPredicted RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 CLEC1AQ8NC01 280 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 SNX33Q8WV41 574 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 GTF3AQ92664 365 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 GLYATL1Q969I3 302 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 HIST1H2BAQ96A08 127 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 TAAR9Q96RI9 348 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 MNTQ99583 582 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 AIF1LQ9BQI0 150 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 RIOK2Q9BVS4 552 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 POTEKPQ9BYX7 375 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 SEC61A2Q9H9S3 476 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 SIGLEC7Q9Y286 467 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 ZNF443Q9Y2A4 671 aaPredicted RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 TBC1D3EA0A087X179 549 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 A0A0A6YYD5 115 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 NPIPB9F8W1W9 429 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 BLOC1S5-TXNDC5H3BN57 136 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 EMC8O43402 210 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 GREM1O60565 184 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 CLN5O75503 358 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 ANXA2P07355 339 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 CLUP10909 449 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 CFPP27918 469 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 PPT1P50897 306 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 CAPZA1P52907 286 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 EPHB3P54753 998 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 SMAD3P84022 425 aaKnown RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 LMAN2Q12907 356 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 FAM76BQ5HYJ3 339 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 TMEM244Q5VVB8 128 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 TMEM220Q6QAJ8 160 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 STAC2Q6ZMT1 411 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 Q6ZVL8 140 aa9.76□□□□□ -0.85
SIK3-210ENST00000480468 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
SIK3-210ENST00000480468 DCUN1D3Q8IWE4 304 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms