RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MT-ND1P03886 318 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 UMPSP11172 480 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 CCKARP32238 428 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 MSX2P35548 267 aaPredicted RBP18.13■□□□□ 0.49
VARS-224ENST00000479051 YAP1P46937 504 aaKnown RBP18.13■□□□□ 0.49
VARS-224ENST00000479051 FOXD4Q12950 439 aaPredicted RBP18.13■□□□□ 0.49
VARS-224ENST00000479051 ITGADQ13349 1161 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 TRAM2Q15035 370 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 DAZAP2Q15038 168 aaPredicted RBP18.13■□□□□ 0.49
VARS-224ENST00000479051 ZNF74Q16587 644 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 DNAL1Q4LDG9 190 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 SFRP5Q5T4F7 317 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 NKAIN4Q8IVV8 208 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 UEVLDQ8IX04 471 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 OR5J2Q8NH18 312 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 TMEM255BQ8WV15 326 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 MCUR1Q96AQ8 359 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 PYURFQ96I23 114 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 MOGAT1Q96PD6 335 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 ZNF385AQ96PM9 386 aaKnown RBP18.13■□□□□ 0.49
VARS-224ENST00000479051 ZNF229Q9UJW7 825 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 ENPP4Q9Y6X5 453 aa18.13■□□□□ 0.49
VARS-224ENST00000479051 CELSR2Q9HCU4 2923 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 LOC102725191A0A1B0GVB3 256 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 IGF2P01344 180 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 PRF1P14222 555 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 ITGA2P17301 1181 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 LTBQ06643 244 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 PUDPQ08623 228 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 MTX3Q5HYI7 312 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 FBXW10Q5XX13 1052 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 ABHD12BQ7Z5M8 362 aaPredicted RBP18.12■□□□□ 0.49
VARS-224ENST00000479051 TMEM200AQ86VY9 491 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 KDM8Q8N371 416 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 ZIC4Q8N9L1 334 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 WFIKKN1Q96NZ8 548 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 ACTR6Q9GZN1 396 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 ASB6Q9NWX5 421 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 TAS2R1Q9NYW7 299 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 SEC14L4Q9UDX3 406 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 MALT1Q9UDY8 824 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 V9GYQ6 96 aa18.12■□□□□ 0.49
VARS-224ENST00000479051 A6NNC1 897 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 ENO4A6NNW6 628 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 GYG2O15488 501 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 KRT33AO76009 404 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 IGHV3-9P01782 118 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 AHCYP23526 432 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 ANKRD34AQ69YU3 496 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 BHLHA15Q7RTS1 189 aaPredicted RBP18.11■□□□□ 0.49
VARS-224ENST00000479051 EPHX4Q8IUS5 362 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 POMGNT2Q8NAT1 580 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 POP5Q969H6 163 aaKnown RBP18.11■□□□□ 0.49
VARS-224ENST00000479051 SGTBQ96EQ0 304 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 SLCO5A1Q9H2Y9 848 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 RHCGQ9UBD6 479 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 RCE1Q9Y256 329 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 NOX1Q9Y5S8 564 aa18.11■□□□□ 0.49
VARS-224ENST00000479051 LRRN3E7EW58 273 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 J3KTA2 159 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 PLPP3O14495 311 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 ADORA3P0DMS8 318 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 RHCEP18577 417 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 EDNRAP25101 427 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 NTF4P34130 210 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 UGT2B15P54855 530 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 CLDN17P56750 224 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 FAPQ12884 760 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 RRM2BQ7LG56 351 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 NANOGNBQ7Z5D8 188 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 PXKQ7Z7A4 578 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 ZC3HAV1LQ96H79 300 aaKnown RBP18.1■□□□□ 0.49
VARS-224ENST00000479051 THTPAQ9BU02 230 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 ANKRD19PQ9H560 264 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 MEPEQ9NQ76 525 aaPredicted RBP18.1■□□□□ 0.49
VARS-224ENST00000479051 TAS2R16Q9NYV7 291 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 B3GAT1Q9P2W7 334 aa18.1■□□□□ 0.49
VARS-224ENST00000479051 CACNA1DQ01668 2161 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 FREM1Q5H8C1 2179 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 CIB4A0PJX0 185 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 MS4A18H0YCH9 400 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 LYZL6O75951 148 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 PDE5AO76074 875 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 COX5AP20674 150 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 IGHV1-2P23083 117 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 POU3F1Q03052 451 aaPredicted RBP18.09■□□□□ 0.49
VARS-224ENST00000479051 TGFBR3Q03167 851 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 TRIM25Q14258 630 aaKnown RBP18.09■□□□□ 0.49
VARS-224ENST00000479051 MS4A18Q3C1V0 323 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 ZNF730Q6ZMV8 503 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 SSX8Q7RTT4 187 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 RNF113BQ8IZP6 322 aaKnown RBP18.09■□□□□ 0.49
VARS-224ENST00000479051 FAM86B1Q8N7N1 296 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 ANKK1Q8NFD2 765 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 PFN4Q8NHR9 129 aa18.09■□□□□ 0.49
VARS-224ENST00000479051 ACOT11Q8WXI4 607 aaPredicted RBP18.09■□□□□ 0.49
VARS-224ENST00000479051 S100PBPQ96BU1 408 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms