RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 DHX33Q9H6R0 707 aaKnown RBP3.8□□□□□ -1.8
CCDC171-207ENST00000478913 AMBNQ9NP70 447 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CUTCQ9NTM9 273 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF446Q9NWS9 450 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 TRMT6Q9UJA5 497 aaKnown RBP3.8□□□□□ -1.8
CCDC171-207ENST00000478913 SLC9A8Q9Y2E8 581 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CR1P17927 2039 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 IGHV1OR21-1A0A087WYE8 117 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 TRBV2A0A0J9YWF9 115 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 MACROD2A1Z1Q3 448 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ALOX12BO75342 701 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 HIST1H2AGP0C0S8 130 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 CALM1P0DP23 149 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 CALM2P0DP24 149 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 CALM3P0DP25 149 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 POLR2EP19388 210 aaKnown RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ACVR1BP36896 505 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 NT5C2P49902 561 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 CNN1P51911 297 aaKnown RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 SLC7A2P52569 658 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF131P52739 623 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 NUP107P57740 925 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 PDIA5Q14554 519 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 C17orf58Q2M2W7 97 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 HKDC1Q2TB90 917 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 DCAF4L1Q3SXM0 396 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 TCHHL1Q5QJ38 904 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ACER2Q5QJU3 275 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 KPRPQ5T749 579 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 WSCD1Q658N2 575 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 SPECC1LQ69YQ0 1117 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 LUZP1Q86V48 1076 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 SLC22A16Q86VW1 577 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 RAB43Q86YS6 212 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 HIST1H2ACQ93077 130 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 NTNG2Q96CW9 530 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 MCCC1Q96RQ3 725 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 C19orf43Q9BQ61 176 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ST6GALNAC5Q9BVH7 336 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 SLC17A9Q9BYT1 436 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 DDX47Q9H0S4 455 aaKnown RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 CARD9Q9H257 536 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 RNF41Q9H4P4 317 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 POPDC2Q9HBU9 364 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 SAMSN1Q9NSI8 373 aaKnown RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 NDUFA13Q9P0J0 144 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 DHRS4-AS1Q9P1J3 65 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 COPS7AQ9UBW8 275 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF107Q9UII5 783 aaPredicted RBP3.79□□□□□ -1.8
CCDC171-207ENST00000478913 RNF24Q9Y225 148 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 TEX264Q9Y6I9 313 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 U3KQK5 164 aa3.79□□□□□ -1.8
CCDC171-207ENST00000478913 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 IGLV3-22A0A075B6J6 115 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TRAV9-2A0A087WT02 112 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 GOLGA6L4A6NEF3 574 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 CCT8L1PA6NM43 557 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 KIF2AO00139 706 aaPredicted RBP3.78□□□□□ -1.8
CCDC171-207ENST00000478913 CYB561D2O14569 222 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF253O75346 499 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 SYNGR4O95473 234 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 PIGRP01833 764 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 IGHG3P01860 377 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 APRTP07741 180 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TPSB2P20231 275 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 GLRA2P23416 452 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 UCP1P25874 307 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TRIM23P36406 574 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 PEX19P40855 299 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 HNRNPFP52597 415 aaKnown RBP3.78□□□□□ -1.8
CCDC171-207ENST00000478913 MFAP2P55001 183 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 HAND2P61296 217 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 VLDLRP98155 873 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 AP1B1Q10567 949 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 CBX3Q13185 183 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TPSAB1Q15661 275 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 INAQ16352 499 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 SLC22A6Q4U2R8 563 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 CCDC183Q5T5S1 534 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 CWC27Q6UX04 472 aaKnown RBP3.78□□□□□ -1.8
CCDC171-207ENST00000478913 APOOLQ6UXV4 268 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 DLEU7Q6UYE1 221 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 NIPA1Q7RTP0 329 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 MIER3Q7Z3K6 550 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 GPD1LQ8N335 351 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TBCKQ8TEA7 893 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 RAB3CQ96E17 227 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TTYH2Q9BSA4 534 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 MLXQ9UH92 298 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 GGA2Q9UJY4 613 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
CCDC171-207ENST00000478913 YLPM1P49750 1951 aaKnown RBP3.78□□□□□ -1.8
CCDC171-207ENST00000478913 MYH6P13533 1939 aa3.78□□□□□ -1.81
CCDC171-207ENST00000478913 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 A0A0A6YYD4 124 aa3.77□□□□□ -1.81
CCDC171-207ENST00000478913 TRAV17A0A0B4J275 112 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms