RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ANKRD61A6NGH8 418 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FAM183AA6NL82 134 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 VSTM5A8MXK1 200 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FAM25AB3EWG3 89 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FAM25CB3EWG5 89 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FAM25GB3EWG6 89 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 C10orf142B7Z368 130 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FAM47E-STBD1D6RA91 191 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NPIPA7E9PJI5 369 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PEX12O00623 359 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TFECO14948 347 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PLA2G10O15496 165 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 LRRTM2O43300 516 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 LYRM1O43325 122 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PLPP2O43688 288 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR10H2O60403 315 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 DNAJB6O75190 326 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PTP4A3O75365 173 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SLC43A1O75387 559 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF205O95201 554 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PPP1R3DO95685 299 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SEMA4FO95754 770 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SERPINA3P01011 423 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 YES1P07947 543 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SBK2P0C263 348 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CT62P0C5K7 136 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NPIPA8P0DM63 369 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SAGP10523 405 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PF4V1P10720 104 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PEPDP12955 493 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RNH1P13489 461 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PVRP15151 417 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF20P17024 532 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SLC2A5P22732 501 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 APEX1P27695 318 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RBMS1P29558 406 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ACSL1P33121 698 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NUDT1P36639 197 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TALDO1P37837 337 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NR4A2P43354 598 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 KIR2DL3P43628 341 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TPMTP51580 245 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CCR5P51681 352 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 GPR143P51810 404 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CAV3P56539 151 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CLDN20P56880 219 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RAB25P57735 213 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 VSX2P58304 361 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FXYD6P3P58550 94 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RPS7P62081 194 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MRPS15P82914 257 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 LGALS3BPQ08380 585 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FGFBP1Q14512 234 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 EXOSC7Q15024 291 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF141Q15928 474 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 COL28A1Q2UY09 1125 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TBRG1Q3YBR2 411 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 KLHL12Q53G59 568 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TIGD3Q6B0B8 471 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 VASNQ6EMK4 673 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PLET1Q6UQ28 207 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM91Q6ZNR0 172 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RTL4Q6ZR62 310 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 Q6ZSR6 202 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 GATAD2AQ86YP4 633 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 C1orf210Q8IVY1 113 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CMIPQ8IY22 773 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF595Q8IYB9 648 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF440Q8IYI8 595 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 Q8N402 240 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MS4A15Q8N5U1 240 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM99Q8N816 258 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 LSMEM1Q8N8F7 131 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TEX19Q8NA77 164 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 AVL9Q8NBF6 648 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CLRN3Q8NCR9 226 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM52Q8NDY8 209 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SIMC1Q8NDZ2 872 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 DUSP18Q8NEJ0 188 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR10H4Q8NGA5 316 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR52R1Q8NGF1 315 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR5M3Q8NGP4 307 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR13C2Q8NGS9 318 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OR5W2Q8NH69 310 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SLC37A2Q8TED4 501 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 OIT3Q8WWZ8 545 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CNOT9Q92600 299 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MRPL48Q96GC5 212 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ST6GAL2Q96JF0 529 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF578Q96N58 590 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 C8orf49Q96NF6 230 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 BBC3Q96PG8 261 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 CCNL2Q96S94 520 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TEAD3Q99594 435 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 PELOQ9BRX2 385 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TTYH2Q9BSA4 534 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM43Q9BTV4 400 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF426Q9BUY5 554 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms