RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 HES7Q9BYE0 225 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 POLR1EQ9GZS1 481 aaKnown RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 POPDC2Q9HBU9 364 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 RAB18Q9NP72 206 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 AIG1Q9NVV5 245 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 KIF25Q9UIL4 384 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NEU3Q9UQ49 428 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ATP6V0A2Q9Y487 856 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PEAK1Q9H792 1746 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 TNS1Q9HBL0 1735 aaKnown RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PARP4Q9UKK3 1724 aaKnown RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ABCC6O95255 1503 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 INSRP06213 1382 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 IGHV3OR16-13A0A075B7E8 117 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 HIP1O00291 1037 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 LGI1O95970 557 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 CCNE1P24864 410 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 LAP3P28838 519 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 OTX2P32243 289 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 TNNT2P45379 298 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 SELENOTP62341 195 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 DAZ2Q13117 558 aaKnown RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 RIPK1Q13546 671 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 CAPRIN1Q14444 709 aaKnown RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 KLF17Q5JT82 389 aaPredicted RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 BEND3Q5T5X7 828 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 TMEM225Q6GV28 225 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 RNF165Q6ZSG1 346 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 SLC35F2Q8IXU6 374 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 TMEM123Q8N131 208 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 FTMTQ8N4E7 242 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 CATSPER1Q8NEC5 780 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 FAM151AQ8WW52 585 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 HTR3CQ8WXA8 447 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 RPUSD4Q96CM3 377 aaKnown RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 ERP44Q9BS26 406 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 PLGRKTQ9HBL7 147 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 DAZ3Q9NR90 486 aaKnown RBP3.29□□□□□ -1.88
PTCD3-211ENST00000476215 BLOC1S6Q9UL45 172 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 V9GY05 133 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 AKAP12Q02952 1782 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 RGPD5Q99666 1765 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 LRP5O75197 1615 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 RLFQ13129 1914 aa3.29□□□□□ -1.88
PTCD3-211ENST00000476215 TNS2Q63HR2 1409 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 SBF2Q86WG5 1849 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 FLT4P35916 1363 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 KIF24Q5T7B8 1368 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 METTL21EPA6NDL7 271 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 DCTN6O00399 190 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 PRRG1O14668 218 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 PFKFB2O60825 505 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 NPIPB7O75200 414 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 KLF8O95600 359 aaPredicted RBP3.28□□□□□ -1.88
PTCD3-211ENST00000476215 P04436 131 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF17P17021 662 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 COX5AP20674 150 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 GCAP28676 217 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 CALCRP30988 508 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 SHMT2P34897 504 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 PTGDSP41222 190 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 KLK7P49862 253 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 PRPS1P60891 318 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 GANABQ14697 944 aaKnown RBP3.28□□□□□ -1.88
PTCD3-211ENST00000476215 GPRC6AQ5T6X5 926 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 IGFL2Q6UWQ7 119 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 Q6ZVH6 145 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 GDPD3Q7L5L3 318 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 CCDC50Q8IVM0 306 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MKXQ8IYA7 352 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 OR2L13Q8N349 312 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MAIP1Q8WWC4 291 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 RLN3Q8WXF3 142 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 RDH5Q92781 318 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 UCN3Q969E3 161 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 SLC35E1Q96K37 410 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 HIST1H4GQ99525 98 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 TSG101Q99816 390 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 SLC25A22Q9H936 323 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 PIPOXQ9P0Z9 390 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 COPS3Q9UNS2 423 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 ASF1AQ9Y294 204 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MRPS7Q9Y2R9 242 aaKnown RBP3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MEMO1Q9Y316 297 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MEGF6O75095 1541 aa3.28□□□□□ -1.88
PTCD3-211ENST00000476215 MON2Q7Z3U7 1717 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 RTL1A6NKG5 1358 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NSD2O96028 1365 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 CEP350Q5VT06 3117 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 LRRC37A3O60309 1634 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 PCDH11XQ9BZA7 1347 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 IGKV1D-8A0A087WSZ0 117 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 A6NIZ1 184 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 IDSB3KWA1 339 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 F5H6K3 240 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 GFYI3L273 518 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 HCRTR1O43613 425 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 TRAF3IP2O43734 574 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms