RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 CHRNA9Q9UGM1 479 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 BLOC1S6Q9UL45 172 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 SNX6Q9UNH7 406 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 GPR179Q6PRD1 2367 aa2.33□□□□□ -2.04
LTN1-204ENST00000475344 PHF3Q92576 2039 aaKnown RBP2.32□□□□□ -2.04
LTN1-204ENST00000475344 A0A0G2JLM5 398 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 A0A0G2JN53 185 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 COLCA2A8K830 154 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 K7EQM0 130 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 ANGPTL7O43827 346 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 SS18L1O75177 396 aaPredicted RBP2.32□□□□□ -2.04
LTN1-204ENST00000475344 CTDNEP1O95476 244 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 UGT2B4P06133 528 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 IQCF3P0C7M6 154 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 POU2F1P14859 743 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 MMP11P24347 488 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 PTGDSP41222 190 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 MAP3K8P41279 467 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 KIR2DS4P43632 304 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 VDAC2P45880 294 aaPredicted RBP2.32□□□□□ -2.04
LTN1-204ENST00000475344 SLC15A2Q16348 729 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 DPYSL2Q16555 572 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 NSUN5P1Q3KNT7 163 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 TRPV1Q8NER1 839 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 PELI1Q96FA3 418 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 TAAR1Q96RJ0 339 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 ZNF607Q96SK3 696 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 PALMDQ9NP74 551 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 AATFQ9NY61 560 aaKnown RBP eCLIP2.32□□□□□ -2.04
LTN1-204ENST00000475344 IL36GQ9NZH8 169 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 CGNQ9P2M7 1197 aaKnown RBP2.32□□□□□ -2.04
LTN1-204ENST00000475344 OPN4Q9UHM6 478 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 COPS3Q9UNS2 423 aa2.32□□□□□ -2.04
LTN1-204ENST00000475344 PAX7P23759 505 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CXCR2P25025 360 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CALCRP30988 508 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 SHMT2P34897 504 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 HSPA2P54652 639 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 SPIBQ01892 262 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 ZNF763Q0D2J5 394 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 TP53I3Q53FA7 332 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CFAP157Q5JU67 520 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 TPGS2Q68CL5 300 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CTRB2Q6GPI1 263 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CCDC80Q76M96 950 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 HMGN2P46Q86SG4 172 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 FTMTQ8N4E7 242 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 ATP6V0D2Q8N8Y2 350 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 CCDC54Q8NEL0 328 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 STEAP2Q8NFT2 490 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 DTX3LQ8TDB6 740 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 RSPH1Q8WYR4 309 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 EDEM2Q9BV94 578 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 FOLH1BQ9HBA9 442 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 UFSP2Q9NUQ7 469 aa2.31□□□□□ -2.04
LTN1-204ENST00000475344 YTHDF2Q9Y5A9 579 aaKnown RBP2.31□□□□□ -2.04
LTN1-204ENST00000475344 IGHV1OR21-1A0A087WYE8 117 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 LRP5LA4QPB2 252 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 ARPC3O15145 178 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 B4GALT5O43286 388 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 GMFGO60234 142 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 AP2A1O95782 977 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 DBTP11182 482 aaKnown RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 POLR2EP19388 210 aaKnown RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 CMA1P23946 247 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 LAP3P28838 519 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 FMO3P31513 532 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SLC26A3P40879 764 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 GRIA1P42261 906 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 CRYBB1P53674 252 aaPredicted RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 C1orf61Q13536 156 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 PDK3Q15120 406 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 CHRFAM7AQ494W8 412 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 LRRC23Q53EV4 343 aaPredicted RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 C10orf120Q5SQS8 335 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 C1orf220Q5T0J3 134 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 FRMPD2BQ6IN97 320 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 PPP1R42Q7Z4L9 355 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SLC35F2Q8IXU6 374 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SLC38A6Q8IZM9 456 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 CATSPER1Q8NEC5 780 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 OR10G3Q8NGC4 313 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 OR2T3Q8NH03 318 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 PAGE5Q96GU1 130 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 COQ2Q96H96 371 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 LRRN3Q9H3W5 708 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 CLMPQ9H6B4 373 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SUDS3Q9H7L9 328 aaPredicted RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 POPDC2Q9HBU9 364 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SMOXQ9NWM0 555 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 SMPD3Q9NY59 655 aaPredicted RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 HEBP2Q9Y5Z4 205 aa2.3□□□□□ -2.04
LTN1-204ENST00000475344 TET2Q6N021 2002 aaPredicted RBP2.3□□□□□ -2.04
LTN1-204ENST00000475344 BRWD3Q6RI45 1802 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 IGKV1D-8A0A087WSZ0 117 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 C15orf38-AP3S2A0A0A6YYH1 394 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 A0A1B0GUS0 222 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 HIP1O00291 1037 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 DCTN6O00399 190 aa2.29□□□□□ -2.04
LTN1-204ENST00000475344 PRRG1O14668 218 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms