RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 EFEMP1Q12805 493 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KRR1Q13601 381 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 RBBP7Q16576 425 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TMPRSS12Q86WS5 348 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 C19orf47Q8N9M1 422 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM159Q96B96 161 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM185BQ9H7F4 350 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 MIEF1Q9NQG6 463 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SIDT1Q9NXL6 827 aaKnown RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 BPTFQ12830 3046 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 LOC100130705A0A1B0GUX0 176 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 A8MVM7 634 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TYROBPO43914 113 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 AGFG2O95081 481 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ELFN1P0C7U0 828 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CD79AP11912 226 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PROZP22891 400 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SERPINA4P29622 427 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 FASLGP48023 281 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CSNK2A1P68400 391 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SCN1BQ07699 218 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CDKN3Q16667 212 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 LY6KQ17RY6 165 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 RAB41Q5JT25 222 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 C1orf220Q5T0J3 134 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 GJB7Q6PEY0 223 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CXCL17Q6UXB2 119 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TPRG1Q6ZUI0 275 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SLC26A11Q86WA9 606 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 C1QL4Q86Z23 238 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 VRK3Q8IV63 474 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ARIH2OSQ8N7S6 290 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CSNK2A3Q8NEV1 391 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 GPR151Q8TDV0 419 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF775Q96BV0 537 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-206ENST00000474871 GPR146Q96CH1 333 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF354BQ96LW1 612 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ATF6BQ99941 703 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CHRDL1Q9BU40 450 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 STRADBQ9C0K7 418 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PDGFCQ9NRA1 345 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CUTCQ9NTM9 273 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PLEKHJ1Q9NW61 149 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 CACNA2D2Q9NY47 1150 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 HAO2Q9NYQ3 351 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 KLK14Q9P0G3 267 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 ABI3Q9P2A4 366 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 B3GAT1Q9P2W7 334 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PRODH2Q9UF12 536 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 SLC35A3Q9Y2D2 325 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 PLXNA1Q9UIW2 1896 aa4.45□□□□□ -1.7
NPHP3-206ENST00000474871 OR5H14A6NHG9 310 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 CBY3A6NI87 242 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF726A6NNF4 738 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 KPNA3O00505 521 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 ACOT8O14734 319 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 NRP2O60462 931 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 RAMP2O60895 175 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 STK16O75716 305 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 AQP8O94778 261 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 SCELO95171 688 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 KNG1P01042 644 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 KITLGP21583 273 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 ABRAXAS2Q15018 415 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 C5orf47Q569G3 176 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 OR2A2Q6IF42 318 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 KIAA1211LQ6NV74 962 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 ZNF562Q6V9R5 426 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 SLCO4C1Q6ZQN7 724 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 CDHR3Q6ZTQ4 885 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 GTPBP8Q8N3Z3 284 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 TM9SF4Q92544 642 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 EID2BQ96D98 161 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 JSRP1Q96MG2 331 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 SLC35A5Q9BS91 424 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 PDCD10Q9BUL8 212 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 GATA5Q9BWX5 397 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 TSPAN10Q9H1Z9 355 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 MMP28Q9H239 520 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 METTL17Q9H7H0 456 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 OR2S2Q9NQN1 319 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 LRIT1Q9P2V4 623 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 LPAR3Q9UBY5 353 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 JPT1Q9UK76 154 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 NENFQ9UMX5 172 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 MSGN1A6NI15 193 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 ANKRD66B4E2M5 251 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 CDC40O60508 579 aaKnown RBP eCLIP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 IFNA5P01569 189 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 LGALS2P05162 132 aa4.44□□□□□ -1.7
NPHP3-206ENST00000474871 NME1P15531 152 aaKnown RBP4.44□□□□□ -1.7
NPHP3-206ENST00000474871 FAHP16930 419 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms