RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PTGER1P34995 402 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ECI1P42126 302 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 OR3A1P47881 315 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 LGALS4P56470 323 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CDKL1Q00532 357 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TLE1Q04724 770 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TCP10Q12799 353 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MLLT11Q13015 90 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 DGUOKQ16854 277 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 VWC2Q2TAL6 325 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 HENMT1Q5T8I9 393 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 PMS2CLQ68D20 193 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TXNRD3NBQ6F5E7 133 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TMEM107Q6UX40 140 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 NUFIP2Q7Z417 695 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 ADAT2Q7Z6V5 191 aaKnown RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 UBALD2Q8IYN6 164 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZDHHC23Q8IYP9 409 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 LGI3Q8N145 548 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 FGFRL1Q8N441 504 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TMEM251Q8N6I4 163 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ZNF655Q8N720 491 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 FAM110BQ8TC76 370 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MRAPQ8TCY5 172 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 WIPF2Q8TF74 440 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 IGSF8Q969P0 613 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 SLCO4A1Q96BD0 722 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 BPIFA2Q96DR5 249 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 MUS81Q96NY9 551 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CRAMP1Q96RY5 1269 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PLEKHF1Q96S99 279 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 CCDC32Q9BV29 185 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 TMEM121BQ9BXQ6 578 aaPredicted RBP3.18□□□□□ -1.9
UBR3-208ENST00000474426 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 ELOVL3Q9HB03 270 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 LRP12Q9Y561 859 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 GRIN2AQ12879 1464 aa3.18□□□□□ -1.9
UBR3-208ENST00000474426 PRSS38A1L453 326 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TEX22C9J3V5 150 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CLDN34H7C241 214 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 K7EN84 100 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 GPR31O00270 319 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 MAN2B1O00754 1011 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 OR1F1O43749 312 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SSNA1O43805 119 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PRICKLE3O43900 615 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 MPIG6BO95866 241 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IGFBP2P18065 325 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CCKBRP32239 447 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CLDN12P56749 244 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RIPPLY3P57055 190 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PPP3R1P63098 170 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IL13RA1P78552 427 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CXCL9Q07325 125 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 NSDHLQ15738 373 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TMEM176BQ3YBM2 270 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 NKAPLQ5M9Q1 402 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ELFN2Q5R3F8 820 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TCTN3Q6NUS6 607 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RNF111Q6ZNA4 994 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 MDGA2Q7Z553 956 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IRF2BP2Q7Z5L9 587 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 DHDDSQ86SQ9 333 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SKA3Q8IX90 412 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 DTWD2Q8NBA8 298 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC26A10Q8NG04 563 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RNF138Q8WVD3 245 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RERGQ96A58 199 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 RPUSD4Q96CM3 377 aaKnown RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 TLCD1Q96CP7 247 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 F2RL3Q96RI0 385 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CACYBPQ9HB71 228 aaKnown RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 ANKHQ9HCJ1 492 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 GDF3Q9NR23 364 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 GPR27Q9NS67 375 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 RRP7BPQ9NSQ0 103 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 TFCP2L1Q9NZI6 479 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 KIF25Q9UIL4 384 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC35A3Q9Y2D2 325 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SYNJ1O43426 1573 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 DIP2AQ14689 1571 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 PLA2R1Q13018 1463 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 C13orf42A0A1B0GVH6 325 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 ANKRD30BLA7E2S9 258 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 C1orf196B1AJZ1 125 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 H7C417 338 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 M0R036 132 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 SLC16A5O15375 505 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 LDB2O43679 373 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 FCGR3BO75015 233 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 VENTXO95231 258 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CT62P0C5K7 136 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 MYL2P10916 166 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CYP7A1P22680 504 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 MMP11P24347 488 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 HTR2AP28223 471 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 CD68P34810 354 aaPredicted RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 SNRPD2P62316 118 aaKnown RBP3.17□□□□□ -1.9
UBR3-208ENST00000474426 CDK6Q00534 326 aa3.17□□□□□ -1.9
UBR3-208ENST00000474426 IRF9Q00978 393 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms