RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 LINC00615Q96LM1 132 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 EXO5Q9H790 373 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 SYNPO2LQ9H987 977 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 ASF1BQ9NVP2 202 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 CES1P1Q9UKY3 287 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 LEFTY2O00292 366 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 HOXA2O43364 376 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 BCL2L11O43521 198 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 CLEC3AO75596 197 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 AKR7A3O95154 331 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 PAPLNO95428 1278 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 LAG3P18627 525 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 MPIP34949 423 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 DND1Q8IYX4 353 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 CDK20Q8IZL9 346 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 CYB5D2Q8WUJ1 264 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 PHYHIPLQ96FC7 376 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 MRI1Q9BV20 369 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 TSPAN10Q9H1Z9 355 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 MEPEQ9NQ76 525 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC22A11Q9NSA0 550 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 USP36Q9P275 1121 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 NCDNQ9UBB6 729 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ICAM5Q9UMF0 924 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF281Q9Y2X9 895 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 TBC1D3EA0A087X179 549 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ERI3O43414 337 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 SGCEO43556 437 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ZFPL1O95159 310 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 F12P00748 615 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 HIST1H1TP22492 207 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 NANOS3P60323 173 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF345Q14585 488 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 YOD1Q5VVQ6 348 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC6A19Q695T7 634 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC48A1Q6P1K1 146 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 STAC2Q6ZMT1 411 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 OR2L13Q8N349 312 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ACOT4Q8N9L9 421 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 OR52E2Q8NGJ4 325 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 PXYLP1Q8TE99 480 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 VRK1Q99986 396 aaPredicted RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 CRB3Q9BUF7 120 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 MENTQ9BUN1 341 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 MYEF2Q9P2K5 600 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 TNFSF18Q9UNG2 199 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 CCL26Q9Y258 94 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 ETV7Q9Y603 341 aa17.06■□□□□ 0.32
ECHDC1-214ENST00000474289 USP34Q70CQ2 3546 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 OR5H14A6NHG9 310 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 PSMD9O00233 223 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM127O75204 238 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 CSF1P09603 554 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 ADRA2CP18825 462 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 AVPI1Q5T686 147 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM215Q68D42 235 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 ADIPOR2Q86V24 386 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 RXFP4Q8TDU9 374 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 RSPH9Q9H1X1 276 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 POFUT1Q9H488 388 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 PRSS16Q9NQE7 514 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 MKL2Q9ULH7 1088 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 IGKV1-8A0A0C4DH67 115 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 MEX3AA1L020 520 aaKnown RBP17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 MEIS3P1A6NDR6 274 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 CD8AP01732 235 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 SOD2P04179 222 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 GTF2F2P13984 249 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 GUCA2AQ02747 115 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 ARHGAP19Q14CB8 494 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 GLT8D1Q68CQ7 371 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 H3F3CQ6NXT2 135 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF600Q6ZNG1 722 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 POMGNT2Q8NAT1 580 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 OR4K13Q8NH42 304 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 TNFRSF13CQ96RJ3 184 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 GSN-AS1Q9NRJ2 163 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 SPHK1Q9NYA1 384 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 TAS2R8Q9NYW2 309 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 IL36AQ9UHA7 158 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 GPN3Q9UHW5 284 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 MED31Q9Y3C7 131 aa17.05■□□□□ 0.32
ECHDC1-214ENST00000474289 XRCC3O43542 346 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 OR2F2O95006 317 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ACTL6AO96019 429 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 IFNGP01579 166 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 RPN2P04844 631 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 GPR1P46091 355 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 BLOC1S1P78537 153 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 LTBQ06643 244 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 OR2F1Q13607 317 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 EIPR1Q53HC9 387 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 MFSD12Q6NUT3 480 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 PARS2Q7L3T8 475 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC16A13Q7RTY0 426 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 OR5K2Q8NHB8 316 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF681Q96N22 645 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 PDCD10Q9BUL8 212 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms