RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ANOS1P23352 680 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PMELP40967 661 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 NUMBP49757 651 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM3BP58499 235 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 UBE2KP61086 200 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 RAP2BP61225 183 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 JAG1P78504 1218 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC7A9P82251 487 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SELENBP1Q13228 472 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 IKZF1Q13422 519 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 CRMP1Q14194 572 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 KRT33BQ14525 404 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM214AQ32MH5 1076 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SIRPB2Q5JXA9 342 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 UTF1Q5T230 341 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 LYSMD4Q5XG99 296 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 LEMD1Q68G75 181 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 CREB3L2Q70SY1 520 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF767PQ75MW2 155 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TRMT1LQ7Z2T5 733 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF738Q8NE65 137 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR13D1Q8NGV5 346 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 OR10K1Q8NGX5 313 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PHOSPHO1Q8TCT1 267 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 SPRYD4Q8WW59 207 aaPredicted RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 IGSF8Q969P0 613 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 KLHDC7BQ96G42 594 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 VSTM2LQ96N03 204 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 MUS81Q96NY9 551 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 PHB2Q99623 299 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 DPH7Q9BTV6 452 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 DUSP16Q9BY84 665 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 COMMD4Q9H0A8 199 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 GAR1Q9NY12 217 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 B3GNT2Q9NY97 397 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 GPR160Q9UJ42 338 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 NDRG4Q9ULP0 352 aaKnown RBP5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 A4GNTQ9UNA3 340 aa5.54□□□□□ -1.52
SMARCE1-208ENST00000474246 UBR2Q8IWV8 1755 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM129A0AVI4 362 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CPED1A4D0V7 1026 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 F5H6K3 240 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RP2O75695 350 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TOX4O94842 621 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 NKX2-2O95096 273 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PAPSS2O95340 614 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 OAS1P00973 400 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 GRPP07492 148 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CD3EP07766 207 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 H2AFB1P0C5Y9 115 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 METTL15P1P0C7V9 234 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SDC4P31431 198 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FOXN2P32314 431 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CSKP41240 450 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 MVDP53602 400 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 EEFSECP57772 596 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RAB2AP61019 212 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TLE4Q04727 773 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 BIKQ13323 160 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SYT6Q5T7P8 510 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SDHAF4Q5VUM1 108 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TMEM198Q66K66 360 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ENPP7Q6UWV6 458 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SIGLEC15Q6ZMC9 328 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 AHSA2Q719I0 299 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PEG10Q86TG7 708 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 STHQ8IWL8 128 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 LGI3Q8N145 548 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 C4orf33Q8N1A6 199 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 C11orf44Q8N8P7 122 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 C8orf31Q8N9H6 132 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 OR2AK2Q8NG84 335 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 OR4F15Q8NGB8 312 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 OR52L2PQ8NGH6 319 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TXNDC15Q96J42 360 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF599Q96NL3 588 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ASAH2Q9NR71 780 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ANKRD10Q9NXR5 420 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 EBF1Q9UH73 591 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CAPN6Q9Y6Q1 641 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FN1P02751 2386 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TSC2P49815 1807 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 hCG_38984A0A1B0GV85 526 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TCP10L2B9ZVM9 353 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RGS5O15539 181 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 LINC01565O15544 149 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 DEAF1O75398 565 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 MED26O95402 600 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 EFEMP2O95967 443 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 HTR1AP08908 422 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 C1GALT1C1LP0DN25 315 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 NR2F6P10588 404 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 MUC1P15941 1255 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 DRD4P21917 467 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CA4P22748 312 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FPR3P25089 353 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms