RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 PCYOX1LQ8NBM8 494 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 KBTBD8Q8NFY9 601 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 OR6T1Q8NGN1 323 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 OR6S1Q8NH40 331 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 SMAP2Q8WU79 429 aaPredicted RBP9.82□□□□□ -0.84
CKS1B-206ENST00000474215 TAMM41Q96BW9 452 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 BOD1Q96IK1 185 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 RADILQ96JH8 1075 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF317Q96PQ6 595 aaPredicted RBP9.82□□□□□ -0.84
CKS1B-206ENST00000474215 EPYCQ99645 322 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 MCHR1Q99705 422 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 C1QTNF6Q9BXI9 259 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 SLC17A5Q9NRA2 495 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 GID8Q9NWU2 228 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 SEC14L4Q9UDX3 406 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 LAMP3Q9UQV4 416 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 MED13LQ71F56 2210 aa9.82□□□□□ -0.84
CKS1B-206ENST00000474215 SHISA9B4DS77 424 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 M0R082 166 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 OVOL3O00110 214 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 SLC22A2O15244 555 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 ATP8B1O43520 1251 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 DANCRP0C864 163 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CDH2P19022 906 aaPredicted RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CD247P20963 164 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CBLP22681 906 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 PTAFRP25105 342 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CD40P25942 277 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CLDN17P56750 224 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 PRPS1P60891 318 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 RPS4XP62701 263 aaKnown RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 LGALS3BPQ08380 585 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 NPTX1Q15818 432 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 REP15Q6BDI9 236 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 NIPAL3Q6P499 406 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 YTHDF3Q7Z739 585 aaKnown RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 RBM45Q8IUH3 476 aaKnown RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF417Q8TAU3 575 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 RASSF5Q8WWW0 418 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 SLC41A3Q96GZ6 507 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 C18orf12Q96KH6 178 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF583Q96ND8 569 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 TMEM43Q9BTV4 400 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 LINC00470Q9BZP3 86 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CISD1Q9NZ45 108 aaKnown RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 B3GAT1Q9P2W7 334 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 MGAT4BQ9UQ53 548 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 RCE1Q9Y256 329 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 AMDHD2Q9Y303 409 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CORINQ9Y5Q5 1042 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 CAPN7Q9Y6W3 813 aa9.81□□□□□ -0.84
CKS1B-206ENST00000474215 SETD2Q9BYW2 2564 aaPredicted RBP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
CKS1B-206ENST00000474215 RAI1Q7Z5J4 1906 aaPredicted RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 MTORP42345 2549 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 CPSF4LA6NMK7 179 aaKnown RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF587BE7ETH6 402 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 MS4A18H0YCH9 400 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 M0R1B8 84 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 CHP2O43745 196 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 UPK3AO75631 287 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ZNF432O94892 652 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 WNT11O96014 354 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 BGLAPP02818 100 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 SOD3P08294 240 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 NQO1P15559 274 aaKnown RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 CRYBA2P53672 197 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 LTBQ06643 244 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 PMS2P3Q13401 168 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 VEZF1Q14119 521 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 PGGHGQ32M88 737 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 MS4A18Q3C1V0 323 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 HIKESHIQ53FT3 197 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ENTPD8Q5MY95 495 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ERICH5Q6P6B1 374 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 SLC22A25Q6T423 547 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 C10orf53Q8N6V4 93 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 SCAIQ8N9R8 606 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ADPRHL1Q8NDY3 354 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ANKK1Q8NFD2 765 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 OR4D11Q8NGI4 311 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 VANGL1Q8TAA9 524 aaPredicted RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 C10orf82Q8WW14 230 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 BCL2L2Q92843 193 aaPredicted RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 Q96MF0 132 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 MOGAT1Q96PD6 335 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ASPNQ9BXN1 380 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 PCDHAC1Q9H158 963 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 ARMCX1Q9P291 453 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 MAGED1Q9Y5V3 778 aaPredicted RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 FLNAP21333 2647 aaKnown RBP9.8□□□□□ -0.84
CKS1B-206ENST00000474215 PRR14LQ5THK1 2151 aa9.8□□□□□ -0.84
CKS1B-206ENST00000474215 TRAPPC13A5PLN9 417 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 RPL36A-HNRNPH2H7BZ11 118 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 CCDC22O60826 627 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 SLC43A1O75387 559 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 LYPD3O95274 346 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 HPRP00739 348 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms