RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PIK3C3Q8NEB9 887 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 OR5J2Q8NH18 312 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 APH1AQ96BI3 265 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SGTBQ96EQ0 304 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 OXGR1Q96P68 337 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF347Q96SE7 839 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 LRMDAQ9H2I8 198 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 MMADHCQ9H3L0 296 aaPredicted RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 ANKRD19PQ9H560 264 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 IL1RAPQ9NPH3 570 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 MRPL39Q9NYK5 338 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 ZNF229Q9UJW7 825 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 TESMINQ9Y4I5 508 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 SPTAN1Q13813 2472 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 HCFC1P51610 2035 aa11.02□□□□□ -0.65
DDX56-209ENST00000473924 UTP20O75691 2785 aaKnown RBP11.02□□□□□ -0.65
DDX56-209ENST00000473924 A0A1W2PRQ8 180 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 PIP5K1CO60331 668 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 FZD7O75084 574 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 PRSS23O95084 383 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 GADD45GO95257 159 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 ADORA3P0DMS8 318 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 IFI30P13284 250 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 FUT1P19526 365 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 OR3A2P47893 321 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 PUDPQ08623 228 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 FAM27E3Q08E93 113 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
DDX56-209ENST00000473924 DGCR6Q14129 220 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 POU4F3Q15319 338 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 HIST2H2BCQ6DN03 193 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 CREB3L2Q70SY1 520 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 AAED1Q7RTV5 226 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 NANOGNBQ7Z5D8 188 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 SPATA24Q86W54 205 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 UEVLDQ8IX04 471 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 CDK20Q8IZL9 346 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 RNF113BQ8IZP6 322 aaKnown RBP11.01□□□□□ -0.65
DDX56-209ENST00000473924 LRRC17Q8N6Y2 441 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 ADPRHL1Q8NDY3 354 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 OR52J3Q8NH60 311 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 ACOT11Q8WXI4 607 aaPredicted RBP11.01□□□□□ -0.65
DDX56-209ENST00000473924 BPIFA2Q96DR5 249 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 ZNF385AQ96PM9 386 aaKnown RBP11.01□□□□□ -0.65
DDX56-209ENST00000473924 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 MAN2C1Q9NTJ4 1040 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 C20orf141Q9NUB4 165 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 SLC7A8Q9UHI5 535 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 AURKCQ9UQB9 309 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 POMPQ9Y244 141 aa11.01□□□□□ -0.65
DDX56-209ENST00000473924 A0A087WUU8 490 aa11□□□□□ -0.65
DDX56-209ENST00000473924 HTR3EA5X5Y0 456 aa11□□□□□ -0.65
DDX56-209ENST00000473924 TUBAL3A6NHL2 446 aa11□□□□□ -0.65
DDX56-209ENST00000473924 AQP12BA6NM10 295 aa11□□□□□ -0.65
DDX56-209ENST00000473924 C11orf98E9PRG8 122 aa11□□□□□ -0.65
DDX56-209ENST00000473924 MS4A18H0YCH9 400 aa11□□□□□ -0.65
DDX56-209ENST00000473924 BLOC1S5-TXNDC5H3BN57 136 aa11□□□□□ -0.65
DDX56-209ENST00000473924 PLPP3O14495 311 aa11□□□□□ -0.65
DDX56-209ENST00000473924 RNF13O43567 381 aa11□□□□□ -0.65
DDX56-209ENST00000473924 SERPINI2O75830 405 aa11□□□□□ -0.65
DDX56-209ENST00000473924 OR7A10O76100 309 aa11□□□□□ -0.65
DDX56-209ENST00000473924 IGF2P01344 180 aa11□□□□□ -0.65
DDX56-209ENST00000473924 IGHV3-9P01782 118 aa11□□□□□ -0.65
DDX56-209ENST00000473924 SAGP10523 405 aaPredicted RBP11□□□□□ -0.65
DDX56-209ENST00000473924 FUT4P22083 530 aa11□□□□□ -0.65
DDX56-209ENST00000473924 SORDQ00796 357 aa11□□□□□ -0.65
DDX56-209ENST00000473924 POU3F1Q03052 451 aaPredicted RBP11□□□□□ -0.65
DDX56-209ENST00000473924 MS4A18Q3C1V0 323 aa11□□□□□ -0.65
DDX56-209ENST00000473924 NIPAL3Q6P499 406 aa11□□□□□ -0.65
DDX56-209ENST00000473924 PODNL1Q6PEZ8 512 aa11□□□□□ -0.65
DDX56-209ENST00000473924 TBPL2Q6SJ96 375 aa11□□□□□ -0.65
DDX56-209ENST00000473924 MBOAT2Q6ZWT7 520 aa11□□□□□ -0.65
DDX56-209ENST00000473924 SLC46A3Q7Z3Q1 461 aa11□□□□□ -0.65
DDX56-209ENST00000473924 PIWIL3Q7Z3Z3 882 aaKnown RBP11□□□□□ -0.65
DDX56-209ENST00000473924 AQP12AQ8IXF9 295 aa11□□□□□ -0.65
DDX56-209ENST00000473924 NRMQ8IXM6 262 aa11□□□□□ -0.65
DDX56-209ENST00000473924 DMRTC2Q8IXT2 367 aaPredicted RBP11□□□□□ -0.65
DDX56-209ENST00000473924 SLC7A13Q8TCU3 470 aa11□□□□□ -0.65
DDX56-209ENST00000473924 TMEM45BQ96B21 275 aa11□□□□□ -0.65
DDX56-209ENST00000473924 SPOCK3Q9BQ16 436 aa11□□□□□ -0.65
DDX56-209ENST00000473924 ENKD1Q9H0I2 346 aa11□□□□□ -0.65
DDX56-209ENST00000473924 KRCC1Q9NPI7 259 aaPredicted RBP11□□□□□ -0.65
DDX56-209ENST00000473924 ZKSCAN7Q9P0L1 754 aaPredicted RBP11□□□□□ -0.65
DDX56-209ENST00000473924 UPB1Q9UBR1 384 aa11□□□□□ -0.65
DDX56-209ENST00000473924 PRSS50Q9UI38 385 aa11□□□□□ -0.65
DDX56-209ENST00000473924 NOX1Q9Y5S8 564 aa11□□□□□ -0.65
DDX56-209ENST00000473924 PTPN13Q12923 2485 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 DHRS12A0PJE2 317 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 C16orf97H3BN30 126 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 AKAP8O43823 692 aaKnown RBP10.99□□□□□ -0.65
DDX56-209ENST00000473924 KRT33AO76009 404 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 HPRP00739 348 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 ADAP00813 363 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 ASAH2BP0C7U1 165 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 RAP2AP10114 183 aa10.99□□□□□ -0.65
DDX56-209ENST00000473924 IGFBP2P18065 325 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms