RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 DOK2O60496 412 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PPP2R1BP30154 601 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PRAMEF14Q5SWL7 426 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 C11orf87Q6NUJ2 197 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TMEM220Q6QAJ8 160 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 FAM111BQ6SJ93 734 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 JAZF1Q86VZ6 243 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SKA3Q8IX90 412 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR5AP2Q8NGF4 316 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 FBXO17Q96EF6 278 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SPSB2Q99619 263 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ZNF426Q9BUY5 554 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TSPAN10Q9H1Z9 355 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 EPHX3Q9H6B9 360 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SAGE1Q9NXZ1 904 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 RCC2Q9P258 522 aaKnown RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SERTAD3Q9UJW9 196 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TRAV27A0A087WT01 109 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 H0YC42 278 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 GATCO43716 136 aaKnown RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 FOSL1P15407 271 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TIMP2P16035 220 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SYN1P17600 705 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PBLDP30039 288 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CAPZA2P47755 286 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 GLT8D1Q68CQ7 371 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR4C11Q6IEV9 310 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ZNF546Q86UE3 836 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 NUDT13Q86X67 352 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR5AR1Q8NGP9 310 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 DUSP19Q8WTR2 217 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 POFUT1Q9H488 388 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 MYOZ1Q9NP98 299 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 H2AFY2Q9P0M6 372 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CHRNA9Q9UGM1 479 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 FBXO4Q9UKT5 387 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SLC35A3Q9Y2D2 325 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TRBV5-5A0A0J9YX44 114 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TMEM127O75204 238 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR2F2O95006 317 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CBR1P16152 277 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 RCC1P18754 421 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 DDX6P26196 483 aaKnown RBP eCLIP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ITPKBP27987 946 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PSMB10P40306 273 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CASRP41180 1078 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SNRPD1P62314 119 aaKnown RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR2F1Q13607 317 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ZIC1Q15915 447 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 VWA2Q5GFL6 755 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TMEM215Q68D42 235 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 Q6ZVU0 165 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PELI2Q9HAT8 420 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 MIOXQ9UGB7 285 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ATG4BQ9Y4P1 393 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 WIPF3A6NGB9 483 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 XRCC3O43542 346 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CD3DP04234 171 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 RAB40ALP0C0E4 278 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR4E1P0C645 316 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 STARD6P59095 220 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TRA2BP62995 288 aaKnown RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ACTC1P68032 377 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ACTA1P68133 377 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SWI5Q1ZZU3 235 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PCGF3Q3KNV8 242 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ZNF671Q8TAW3 534 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CXorf40AQ8TE69 158 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 RAB40AQ8WXH6 277 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 NAA11Q9BSU3 229 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 UQCC1Q9NVA1 299 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 GHRLQ9UBU3 117 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 TRAV8-7A0A075B6U6 113 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 A0A0G2JN53 185 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 LDB3O75112 727 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CLN5O75503 358 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 CTAG2O75638 210 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 HLA-GP17693 338 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 MC3RP41968 323 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 SREBF2Q12772 1141 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 YOD1Q5VVQ6 348 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 H3F3CQ6NXT2 135 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PGAP1Q75T13 922 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ARL14EPQ8N8R7 260 aaPredicted RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 LINC01555Q8NAE3 123 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 ARMC5Q96C12 935 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PIK3IP1Q96FE7 263 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 MNTQ99583 582 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 PAPOLGQ9BWT3 736 aaKnown RBP4.3□□□□□ -1.72
U2SURP-208ENST00000473835 NMNAT2Q9BZQ4 307 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 OR51V1Q9H2C8 321 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 KCNK15Q9H427 330 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 LRFN2Q9ULH4 789 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 V9GY05 133 aa4.3□□□□□ -1.72
U2SURP-208ENST00000473835 C4orf47A7E2U8 309 aa4.29□□□□□ -1.72
U2SURP-208ENST00000473835 SSX5O60225 188 aa4.29□□□□□ -1.72
U2SURP-208ENST00000473835 ABHD16AO95870 558 aa4.29□□□□□ -1.72
U2SURP-208ENST00000473835 PRKAG1P54619 331 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms