RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 V9GYS6 101 aa4.71□□□□□ -1.66
TMEM39A-206ENST00000473684 SMCO3A2RU48 225 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR6C76A6NM76 312 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ZAR1LA6NP61 321 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 IQCF5A8MTL0 148 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LRRN3E7EW58 273 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NPIPA2E9PIF3 369 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 HAS3O00219 553 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MFNGO00587 321 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DVL1O14640 695 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MEIS2O14770 477 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CTDSPLO15194 276 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 INSIG1O15503 277 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RGS14O43566 566 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GMFGO60234 142 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TLR5O60602 858 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 HLA-DPB1P04440 258 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SRPRAP08240 638 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 F7P08709 466 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 WNT4P56705 351 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RAB1AP62820 205 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RPS25P62851 125 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 VAMP2P63027 116 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CDC42EP1Q00587 391 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NOGQ13253 232 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 JOSD1Q15040 202 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 KIAA0040Q15053 153 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 VMACQ2NL98 169 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PRR31Q5SQ13 230 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DACT2Q5SW24 774 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OTUD1Q5VV17 481 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NAPEPLDQ6IQ20 393 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ADAM5Q6NVV9 412 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SLC27A1Q6PCB7 646 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 C1orf122Q6ZSJ8 110 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TAS1R1Q7RTX1 841 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 UNC93AQ86WB7 457 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MCEMP1Q8IX19 187 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LAS2Q8IYD9 372 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST3H2BBQ8N257 126 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CCNYQ8ND76 341 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10G2Q8NGC3 310 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR10AD1Q8NGE0 317 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PHYHIPQ92561 330 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 P2RY11Q96G91 374 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PIWIL1Q96J94 861 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR1F2PQ96R84 312 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SNRNP25Q9BV90 132 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FAIM2Q9BWQ8 316 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LRRN3Q9H3W5 708 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DOK5Q9P104 306 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 IL17BQ9UHF5 180 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GNG8Q9UK08 70 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 POMT1Q9Y6A1 747 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DOCK1Q14185 1865 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ANKRD12Q6UB98 2062 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LTBP2Q14767 1821 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM129A0AVI4 362 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 LRRC14BA6NHZ5 514 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GABRR3A8MPY1 467 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ZNF705EA8MWA4 302 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PRRG1O14668 218 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TGOLN2O43493 480 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SOX15O60248 233 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ENTPD6O75354 484 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 REM1O75628 298 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RPP40O75818 363 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FARS2O95363 451 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RAB36O95755 333 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 SFTPBP07988 381 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TBC1D3HP0C7X1 549 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 EBLN1P0CF75 366 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TYMPP19971 482 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 DTYMKP23919 212 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NMBRP28336 390 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 OR3A1P47881 315 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CCR5P51681 352 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ART1P52961 327 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 CAV3P56539 151 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NKX6-1P78426 367 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PPIGQ13427 754 aaKnown RBP eCLIP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 TMEM132DQ14C87 1099 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM189A2Q15884 450 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 AKR1C8PQ5T2L2 129 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FAM102AQ5T9C2 384 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MEX3BQ6ZN04 569 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 HIST2H3AQ71DI3 136 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 FOXRED2Q8IWF2 684 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 MSRB3Q8IXL7 192 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 BAP18Q8IXM2 172 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 GTPBP8Q8N3Z3 284 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 BPIFB2Q8N4F0 458 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 PTGR2Q8N8N7 351 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 POGLUT1Q8NBL1 392 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 ACBD4Q8NC06 268 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 HJURPQ8NCD3 748 aaPredicted RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 NEIL3Q8TAT5 605 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 RNASEH2CQ8TDP1 164 aaKnown RBP4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 THEM6Q8WUY1 208 aa4.7□□□□□ -1.66
TMEM39A-206ENST00000473684 EXTL1Q92935 676 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms