RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 DIO1P49895 249 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 MAP2K6P52564 334 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 CDH12P55289 794 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 CARD18P57730 90 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 TAS2R41P59536 307 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SORDQ00796 357 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 MS4A2Q01362 244 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 EGR4Q05215 589 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PIN1Q13526 163 aaPredicted RBP8.13□□□□□ -1.11
SMC4-213ENST00000472282 TRIM25Q14258 630 aaKnown RBP8.13□□□□□ -1.11
SMC4-213ENST00000472282 LCN8Q6JVE9 175 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PGM2L1Q6PCE3 622 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 TMPPEQ6ZT21 453 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 DHFR2Q86XF0 187 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 P3H2Q8IVL5 708 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 OSTF1Q92882 214 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SLC38A4Q969I6 547 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 CPNE4Q96A23 557 aaPredicted RBP8.13□□□□□ -1.11
SMC4-213ENST00000472282 MCUR1Q96AQ8 359 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 STARD4Q96DR4 205 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 ASB9Q96DX5 294 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SLC47A1Q96FL8 570 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 LRRC46Q96FV0 321 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SLC41A3Q96GZ6 507 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PRRC1Q96M27 445 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 FOXC2Q99958 501 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 SFXN3Q9BWM7 321 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PRRG4Q9BZD6 226 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 AMBRA1Q9C0C7 1298 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PLEKHF2Q9H8W4 249 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 TIGARQ9NQ88 270 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PAQR5Q9NXK6 330 aaPredicted RBP8.13□□□□□ -1.11
SMC4-213ENST00000472282 SLC7A7Q9UM01 511 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 HDGFL3Q9Y3E1 203 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 ZNF175Q9Y473 711 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 TACC2O95359 2948 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 ABCA4P78363 2273 aa8.13□□□□□ -1.11
SMC4-213ENST00000472282 PRR14LQ5THK1 2151 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 ANKHD1Q8IWZ3 2542 aaKnown RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 DSCAMO60469 2012 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 IGKV1D-42A0A075B6H8 117 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 A0A087WUJ7 227 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 IGHV3-15A0A0B4J1V0 119 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 J3KTA2 159 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 NPIPB7O75200 414 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 OR5F1O95221 314 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 AHSA1O95433 338 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 STAMBPO95630 424 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 PMS2P2O95744 297 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 HRGP04196 525 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 PNMTP11086 282 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 FCGR2AP12318 317 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 KLK2P20151 261 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 FKBP2P26885 142 aaKnown RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 CCKARP32238 428 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 IDUAP35475 653 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 PEX19P40855 299 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 KIR2DL2P43627 348 aaPredicted RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 RIPPLY3P57055 190 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 OR2B6P58173 313 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 RAC3P60763 192 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 CSNK2A1P68400 391 aaPredicted RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 SIRPAP78324 504 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 VLDLRP98155 873 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 FAM27E3Q08E93 113 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 FOXD4Q12950 439 aaPredicted RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 MTX3Q5HYI7 312 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 C1orf140Q5VVS0 124 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 ZNF474Q6S9Z5 364 aaPredicted RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 PAMR1Q6UXH9 720 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 WDR88Q6ZMY6 472 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 FCRLAQ7L513 359 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 KIF18BQ86Y91 864 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 ROBO4Q8WZ75 1007 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 NINJ1Q92982 152 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 PYURFQ96I23 114 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 ZFP3Q96NJ6 502 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 PRSS27Q9BQR3 290 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 POTEKPQ9BYX7 375 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 POLR2J2Q9GZM3 115 aaKnown RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 POLR2J3Q9H1A7 115 aaKnown RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 OPN3Q9H1Y3 402 aaPredicted RBP8.12□□□□□ -1.11
SMC4-213ENST00000472282 LRMDAQ9H2I8 198 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 A4GNTQ9UNA3 340 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 ENPP4Q9Y6X5 453 aa8.12□□□□□ -1.11
SMC4-213ENST00000472282 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 SH3D21A4FU49 640 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 LIPT2A6NK58 231 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ACOT8O14734 319 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 SMAD9O15198 467 aaKnown RBP8.11□□□□□ -1.11
SMC4-213ENST00000472282 DIRAS1O95057 198 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ATE1O95260 518 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 CGAP01215 116 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 SEMG1P04279 462 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 GPIP06744 558 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 ENPP1P22413 925 aa8.11□□□□□ -1.11
SMC4-213ENST00000472282 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms